Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi851g00003 ATGATAGCGATTCTTCAAAATTCAACTCCGACGATTGCACGTTACTCTCTTTCTAATGAGATCAAGAAGTGTTGTAACCAAATAATCATTTCATCGAATCATTGTGTAGATGCATGTATTTTTCTATGTATCAGTGATATTTTATTCCATGGACAGAAACAACATGGAGAGGCTGCTATTGATGATTGTCAAATCTTGAAGAACAAAATAGATTCGTTAAAAGAAAAGATCCATGACGAGCGACTTAAATCAATTAAAGATAAACTTTGGATAAATAGGGAGAATCTTCGGTTTCAACTTTCCGAGGTCATGGCAGCAGTGTCAAGAAATACCTCATTACAGACCGAGGAAGTTAACGCTAAAATGCTTTCTTCAAGAATTGACAATCCTGTCAGTAAGTTTAGTGGTTTCCGTCAGGGTTTAGGAAGGAGAGAACAGATACAAAATCAAGATGTATCCTTTGAGAAAAGTTTCATGTTACCAAGCTCTGAAAAGATACCTCCATATACATTTTGGTTACATTTGGCCAGGAATGAGAGAATGACCAAAGATCAATCATTTGCGGCAAGAAGAAACATATACTATCAACATGGTGGTGAAACAATGATATGTAGTGACACCGAAGAAGAGTGCAAAGAGAATAAAGAAGCTAAACATTTTTCTCAGGGTGAAGACCAAATTCTATGGATGGTATTTGAGGAACATGATTTTACTGAGGAGGCATTGAGTGTTGTTCATAGCTGTATTGGGGGCACTCACTCAGAGATTCAGGAGAGGTATAAATATCTCAAGGAAAAGGACATGCATGCTAAAAATTCTCGAGAAAGTGAATCTATTACTGGAATATGTTTGGACAAAAGTTTGAGTGCCAGTTTAAGTACTTTTGATCACTTTTTCTGTCGTCGTTGCATGATCTATAATTGTCCTTTACATGGATGTTCACAACCCTTAATATATCCTCAATCAGTTTGGAATGAACCAGAAGGTGAGAGTAAACCCTGCAGTGATAATTGTTACCTTAAGATAAAGGATGTCAATACTTCATCAGAAAAACCAACTCTAGAGTCTTCTCCAGATAAAGAAATTAAAAAAACAGAAAATGTTGAAATGGATTATCATTTAGATCTCAATTCAGATGTTAAGGACTCAGATCTGCCAGTCTCATCATTATGTGACTCAACTTCTCCTTGTGAATCTCAAAATTCTCATAAAAAGCTGAAGCGAATCCTAGAGAGCAAAGAAACTGCAAATGGAGATTATAACAAAGAAAGTGCGGAAATCACAGATAAAATAGAATTGTTGCGATTATCCAACTCAATGGAATGGCAAGTTGATGAGAAGCATAGTATATCAGATTGGAAACCTTTAGAGAAAGATTTATATTTGAAGGGAATTGAAATGTTTGGGAGAAACAGTTGTCTTATATTTCGAAACTTACTTTCTGGATTCAAGACTTGCACGGAAATAGCCAGCTACATGCGTGTTGAAGAGGCGGCCCGTAGATCCATAGATGAAAATGGAAAATTTGATGCAAAGTGCACTGACCATGAGATGCGATCAAGTTTAAGGTCATCTAAAAAAAAAGGAAAGAGCAAGCAATTCAAATATTTACCAAAGACTCCACGCCTCAAGCCGAATAGAATTAATGCTGGAGGAAACATACTCCTGACGCATTATACACCTTGTGAGTGTCAAGGAAAGTGTGGAAAACAATGTCCTTGTCGTCTTAATGGATATTGCTGTGAAAAGTATTGTGGGTGCGCTAAACTATGCGGAAATCGGTTCAGAGGATGCCATTGTGTTATAACTCAATGCAGAAAACGAAACTGTCCATGCTTTGCAGCAAACCGGGAATGTGACCCAGATGTCTGTAGAAATTGTTGGGTTAGTTGTGGTGATGGTTCATTAGGAGAGCCACCTCATCATGGAGAAAATGAATGTGAAAACATGAATCTTTCTTTAGGGAAAAAACAAAGGATTCTTTTAGCCAAGTCTGATGTTGCTGGATGGGGAGCCTTCTTAAAGAATCCTGCCAACAAAGATGATTTTTTAGGAGAGTATACAGGTGAATTAATATCTCATACAGAAGCAGAGAAGCGTGGTAAATTGTATGAGCGTGCAGACTTCTCTTTTCTTTTTGACTTGGATGATGAGTATGTTATTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCCTCAAAACCCAACTGTTATGCAAAGGGTATGTTTGTTCGTGGAGACCATCGAGTAGGCATATTTGCTGGGGAACGCATTGAAGCTGGTGAGGAACTTTTCTATGATTACAAGTATGCTGCAAATCACAGAGCACCTGCATGGTTTGTTAAAGCCAATAATGCTGCCAAGAAAAAAGAACTTGCAAATTCTCATGGCAAAGCCAAGAAACGCTAG 2421 0.3763 MIAILQNSTPTIARYSLSNEIKKCCNQIIISSNHCVDACIFLCISDILFHGQKQHGEAAIDDCQILKNKIDSLKEKIHDERLKSIKDKLWINRENLRFQLSEVMAAVSRNTSLQTEEVNAKMLSSRIDNPVSKFSGFRQGLGRREQIQNQDVSFEKSFMLPSSEKIPPYTFWLHLARNERMTKDQSFAARRNIYYQHGGETMICSDTEEECKENKEAKHFSQGEDQILWMVFEEHDFTEEALSVVHSCIGGTHSEIQERYKYLKEKDMHAKNSRESESITGICLDKSLSASLSTFDHFFCRRCMIYNCPLHGCSQPLIYPQSVWNEPEGESKPCSDNCYLKIKDVNTSSEKPTLESSPDKEIKKTENVEMDYHLDLNSDVKDSDLPVSSLCDSTSPCESQNSHKKLKRILESKETANGDYNKESAEITDKIELLRLSNSMEWQVDEKHSISDWKPLEKDLYLKGIEMFGRNSCLIFRNLLSGFKTCTEIASYMRVEEAARRSIDENGKFDAKCTDHEMRSSLRSSKKKGKSKQFKYLPKTPRLKPNRINAGGNILLTHYTPCECQGKCGKQCPCRLNGYCCEKYCGCAKLCGNRFRGCHCVITQCRKRNCPCFAANRECDPDVCRNCWVSCGDGSLGEPPHHGENECENMNLSLGKKQRILLAKSDVAGWGAFLKNPANKDDFLGEYTGELISHTEAEKRGKLYERADFSFLFDLDDEYVIDAYRKGDKLKFANHSSKPNCYAKGMFVRGDHRVGIFAGERIEAGEELFYDYKYAANHRAPAWFVKANNAAKKKELANSHGKAKKR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi851g00003 806 Gene3D SET domain 559 775 IPR046341 -
Vivi851g00003 806 SUPERFAMILY SET domain 532 774 IPR046341 -
Vivi851g00003 806 Coils Coil 56 83 - -
Vivi851g00003 806 SMART CXC_2 593 630 IPR033467 -
Vivi851g00003 806 Pfam CXC domain 597 628 IPR041355 -
Vivi851g00003 806 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 806 IPR025778 GO:0031519
Vivi851g00003 806 ProSiteProfiles SET domain profile. 658 773 IPR001214 GO:0005515
Vivi851g00003 806 CDD SET_EZH 658 774 - -
Vivi851g00003 806 FunFam Putative histone-lysine N-methyltransferase EZH2 559 775 - -
Vivi851g00003 806 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 65 788 IPR045318 GO:0006338|GO:0042054
Vivi851g00003 806 Pfam SET domain 669 772 IPR001214 GO:0005515
Vivi851g00003 806 ProSiteProfiles CXC domain profile. 538 644 IPR026489 -
Vivi851g00003 806 SMART set_7 658 779 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi851g00003 647 772 C2H2 Transcription Factor Family AT2G23740 29.371 4.01e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi851g00003 SET 2.9e-12 No_clan