Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi84g00014 ATGGCTTCGGTTATTTTTATTATTCTTCATTTATTTCTGCAGCTGAGTTGTTGTTTTCGAGTTAGTAACTCGGAGCCGACTCAGGACAAGCAAGCTCTCCTTGCTTTTATTTCACAAACACCACACTCTAACCGTGTTCAATGGAACGCTTCGGATTCCGTTTGTAACTGGGTCGGTGTTCAATGCGACGCTTCAAGTTCCTATGTTTATTCACTCCGTTTACCCGCCGTTGGTCTTGTGGGTCGGGTCCCGTCAAACACAATAGGAAGGCTAACGAATCTGCGTATTCTCAGTCTCCGGTCTAATGGTCTCTCCGGCGAGATCCCTTCCGATTTCTCTAATTTGACTTTTCTTCGTAGTGTATATCTTCAGAAGAATAAATTCTCCGGTGGGTTTCCGTCTAGTTTAACTCGGTTAACTCGTTTGACTCGCTTGGATCTCTCTTCCAACAACTTTTCCGGCTCAATTCCTTTCTCCATCAACAACTTGACTCATCTCAGTGGTTTGTTCTTGGAGAATAACACGTTCTCCGGTAGTCTTCCGAGCATTACTGCAAATTTGAACGGCTTTGATGTTTCTAATAACAATCTCAACGGTTCAATCCCCAAGACGCTGTCGAAATTCCCGGAATCTTCTTTTGCCGGAAACATTAATCTCTGTGGTCCACCATTGAAGTCGTGTAGCCCGTTTTTTCCAGCGCCGGCGCCGTCACCGGGTTTAATTCCGCCGGTGATTAAACCGGGGAAGAAATCTAAGAAGCTTTCCACAGGCGCCATTGTTGCAATTGTAGTAGGTTCTGTTCTGTTCGTAGCGTTACTGCTTCTACTGTTACTATGCTGTCTCCGGAAACGTCGCCGGCAACCAGCGAAACCACCAAAGCCAGTTGTTGCCGCGGCTCGTTCCGCGCCTGCAGAAGCCGGAACATCGTCTTCCAAGGACGATATAACCGGTGGATCAGCAGAAGAAGCGAGGAACAAATTGGTGTTCTTTGACGGAGGAATATACAGTTTTGATTTGGAGGATTTGCTTAGGGCTTCTGCGGAGGTTTTGGGAAAGGGAAGCGTTGGGACTTCGTATAAAGCGGTGTTGGAAGAAGGAACTACGGTGGTTGTTAAGAGGTTGAAAGATGTTGTTGTTACAAAGAAAGAGTTTGAGATGCAAATGGAGATTCTGGGTAAAATTAAGCATGAGAATGTGGTTCCTCTTAGAGCTTTTTACTTCTCCAAAGATGAGAAATTGCTTGTGTATGATTACATGCCCGCCGGTAGCTTATCTGCTCTACTTCACGGAAGCAGAGGATCTGGGCGAACACCGTTAGATTGGGACAACCGAATGAGAATAGCCCTCGGAGCATCAAGAGGACTAGCATGCCTCCACGTGTCAGGCAAAGTAGTCCACGGCAACATTAAATCTTCCAACATCCTCCTCCGAGGACCCGACAATGACGCAGGCGTTTCGGACTTTGGTCTCAACCCGTTATTCGGAAACGGATCTCCATCAAACCGGGTCGCTGGCTACCGGGCACCCGAAACCCTAGAAACCCGAAAAGTCACATTCAAATCCGATGTATACAGCTTCGGCGTTTTGCTGTTGGAGCTATTAACAGGAAAAGCACCCAATCAAGCTTCACTAGGTGAAGAAGGAATCGATCTACCAAGGTGGGTCCAATCCGTTGTTCGCGAAGAATGGACCGCAGAGGTTTTTGACGCTGAGTTGATGAGGTTTCATAATATCGAAGAAGAGATGGTTCAGTTGTTGCAGATAGCGATGGCTTGTGTTTCTGTGGTGCCTGATCAGAGACCAAGTATGCAAGACGTGGTGCGCATGATTGAGGATATGAATCGTGGGGAGACTGATGAGGGTCTTCGTCAGTCGTCGGATGATCCTTCTAAAGGATCCGAGGGTCATACTCCACCTCAGACTAGGACTCCACCTAGATCGCGCACACCGTAG 1953 0.4736 MASVIFIILHLFLQLSCCFRVSNSEPTQDKQALLAFISQTPHSNRVQWNASDSVCNWVGVQCDASSSYVYSLRLPAVGLVGRVPSNTIGRLTNLRILSLRSNGLSGEIPSDFSNLTFLRSVYLQKNKFSGGFPSSLTRLTRLTRLDLSSNNFSGSIPFSINNLTHLSGLFLENNTFSGSLPSITANLNGFDVSNNNLNGSIPKTLSKFPESSFAGNINLCGPPLKSCSPFFPAPAPSPGLIPPVIKPGKKSKKLSTGAIVAIVVGSVLFVALLLLLLLCCLRKRRRQPAKPPKPVVAAARSAPAEAGTSSSKDDITGGSAEEARNKLVFFDGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALGASRGLACLHVSGKVVHGNIKSSNILLRGPDNDAGVSDFGLNPLFGNGSPSNRVAGYRAPETLETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDMNRGETDEGLRQSSDDPSKGSEGHTPPQTRTPPRSRTP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi84g00014 650 Gene3D Ribonuclease Inhibitor 187 228 IPR032675 -
Vivi84g00014 650 SUPERFAMILY L domain-like 28 223 - -
Vivi84g00014 650 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 419 624 - -
Vivi84g00014 650 PANTHER OS05G0588300 PROTEIN 10 623 - -
Vivi84g00014 650 FunFam pollen receptor-like kinase 1 313 418 - -
Vivi84g00014 650 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Vivi84g00014 650 CDD STKc_IRAK 350 613 - -
Vivi84g00014 650 MobiDBLite consensus disorder prediction 612 630 - -
Vivi84g00014 650 Gene3D Phosphorylase Kinase; domain 1 312 418 - -
Vivi84g00014 650 ProSiteProfiles Protein kinase domain profile. 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi84g00014 650 MobiDBLite consensus disorder prediction 612 650 - -
Vivi84g00014 650 SUPERFAMILY Protein kinase-like (PK-like) 348 610 IPR011009 -
Vivi84g00014 650 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Vivi84g00014 650 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi84g00014 650 MobiDBLite consensus disorder prediction 291 318 - -
Vivi84g00014 650 Gene3D Transferase(Phosphotransferase) domain 1 419 631 - -
Vivi84g00014 650 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi84g00014 7 631 Receptor kinase-like Gene Family AT5G58300 52.681 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi84g00014 Pkinase 9.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi84g00014 - - gmx:100806857 984.941