Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi847g00014 ATGGGAACTTACATTGAAAATCATGTAGAAGAGAATGAACACATTTTCCGCAGCCAATATTCGCCCGTTCCGGTACCCGAAAACGTGACATTGCCCGAATTCGTGCTCCAAAATGTTGAGTTTTATGGTGATAAGGTTGCATTTGTGGATGCTGAGAGTGGAAAAGAGGTTACTTATAATGAGGTTGCTAGAGACATATATAGATTTTCAAAGGCTTTAAGGTCTCTTGGTTTGAGAAAAGGGAATGTTGTTATTGTTGTACTTCCAAATGTTGTTGAGTATGCCATTGTTGCTTTGGGGATTATGGCTTCTGGTGGTGTGTTCTCTGGTGCAAATCCATCTTCACATACTTCAGAAATTAAGAAACAAGTTGAGTCTGCTGATGCCAAGTTAATTGTCACCAATAGTACAACCTATGAAAAGGTGAAAAGTCTAGGACTACCTGTCATTGTCTTAGACGACGAAATTGTTGAGGATGCGATGAACTGGAAGAAACTTCTTGAGGCAGCAGACAGGGCAGGTGATGATCAAATGAAAGAACCAATTCACCAAAACGACCTATGCGCCATGCCATTCTCGTCTGGCACGACCGGAATGTCAAAGGGAGTGATGCTTACACACAGAAACCTTGTAGCAAATCTTTGCTCTACACTTTTTGCTGTAGTGCCAGAAATGATTGGTAAAGTTACCACATTAGGGTTGATTCCATTCTTTCATATTTATGGCATCACTGGAATTTGTTGTGCAACTATAAGGAACAAGGGAAAGGTTGTGGTGATGGGAAGATATGATTTGAAATCATTTTTGAATGCTTTGATTAGGCATGAGGTTACATTTGCACCTATTGTTCCACCAATTATTCTTGGATTGGTTAAAAATCCTATTGTGGATGAGTTTGATCTTAGTAAGCTTAAACTTCAAGCTGTGATGACTGCTGCGGCGCCACTTGCACCCGAATTGCTTACTTCCTTCGAACACAAGTTTCCCGGTGTTCTTGTTCAAGAGGCATATGGACTAACTGAGCATAGTTGCATCACACTTACATTTGCACAAAAGAAAAGTGGAAATGCACATAAGAATTCAGTTGGTTTCATTCTTCCAAATTTGGAAGTCAAATTCATTGATCCTGAAACTGGCAAGTCCCTTCCAAGGAACACACCAGGGGAACTTTGTGTAAGAAGCCAATGTGTCATGCAAGGTTACTATAAGCAAGTTGATGAGACTGCTCAGACTATTGACAAGAACGGATGGCTTCACACCGGGGACGTTGGATTCATCGATGATGAAGAAAATGTTTTTATCGTTGATCGTATCAAGGAGTTGATTAAATATAAAGGCTTCCAAGTTGCTCCTGCAGAACTGGAGGCTATCTTGCTGTCTCATTCCTCGGTCGAAGACGCAGCAGTCGTACCGTTGCCGGACGAAGAGGCAGGCGAAATTCCAGCTGCAAGTGTTGTTTTGAGCAAAGGTGCAAAGGAGAGTGAAGAGGACATTATGAAATTTGTTGCTTCTAATGCAGCTCATTACAAGAAAGTGAGAGTGGTGCACTTTGTGGAAGCTATCCCAAAGTCACCTTCTGGTAAAATAATGAGAAGGCTTGTGAAAGAGAAGATGGTGGAAAAGATCAAGGAAAATAACAACTTAACTAAATCCAACACTAAATAA 1665 0.4096 MGTYIENHVEENEHIFRSQYSPVPVPENVTLPEFVLQNVEFYGDKVAFVDAESGKEVTYNEVARDIYRFSKALRSLGLRKGNVVIVVLPNVVEYAIVALGIMASGGVFSGANPSSHTSEIKKQVESADAKLIVTNSTTYEKVKSLGLPVIVLDDEIVEDAMNWKKLLEAADRAGDDQMKEPIHQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFAVVPEMIGKVTTLGLIPFFHIYGITGICCATIRNKGKVVVMGRYDLKSFLNALIRHEVTFAPIVPPIILGLVKNPIVDEFDLSKLKLQAVMTAAAPLAPELLTSFEHKFPGVLVQEAYGLTEHSCITLTFAQKKSGNAHKNSVGFILPNLEVKFIDPETGKSLPRNTPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTGDVGFIDDEENVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPDEEAGEIPAASVVLSKGAKESEEDIMKFVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLVKEKMVEKIKENNNLTKSNTK 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi847g00014 554 Gene3D - 13 439 IPR042099 -
Vivi847g00014 554 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 439 - -
Vivi847g00014 554 Pfam AMP-binding enzyme 38 444 IPR000873 -
Vivi847g00014 554 SUPERFAMILY Acetyl-CoA synthetase-like 14 544 - -
Vivi847g00014 554 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 537 - -
Vivi847g00014 554 Gene3D - 440 543 IPR045851 -
Vivi847g00014 554 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Vivi847g00014 554 CDD 4CL 25 532 - -
Vivi847g00014 554 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Vivi847g00014 554 FunFam 4-coumarate--CoA ligase 2 440 541 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi847g00014 10 539 Monolignol Biosynthesis Gene Families AT1G62940 73.496 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi847g00014 K01904 - gmx:100811418 930.628