Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi847g00005 ATGGAGCATGAATATCCTTTCATTCACAATGATCAAAACTCAATATCAAGTTCTGGTTCATCTATGTTGCAGCAAACTAGTGCCTCTACAGATGCTGAAAAAACCCCTACGACAATGAACCCTACAAAGCTTGCCATTGTGCCACAATTGACAAGGCCAGAGCAAAATTCATTGCCATTAAAAAATGTGACAAAAATCATGAGAAAAGGTTTGCCACCACACATAAAAATCTCCGATGGAGCAAAGGAGATGACTGAACAAAGTGCCTCAAAGTTCATTAGCATGGTAACCAAAAAAGCCACCGAGCGTTGCATAAGAGAGTCAAGAAAAATTTTAGGTGCTGAAGATCTATTATGGGCCATGATGAGTTTAGGTTACCATAACTATTTTAAGAGTTTGAGCTTATATCTCGAACGCTATCGCTATAGTAATGGGATTAGGCCTATGCAAATGGTCTGTGAGATTCCAAAGCCCATCTTACCATCTTGTGAGGTTTCTCAACAAGGCTTACCACCACCACCACCACCACCACCTCCACCTCCACCACCGGTTGCTCTTGAGGCAAACTCGTCGATGAACCGAAACAGTTCTATTGAGATTGCTGAAGAAATTAACATTGATGAGTTTTGGGATGAACTGAGTAATTTGGGTGATGACTAG 660 0.4121 MEHEYPFIHNDQNSISSSGSSMLQQTSASTDAEKTPTTMNPTKLAIVPQLTRPEQNSLPLKNVTKIMRKGLPPHIKISDGAKEMTEQSASKFISMVTKKATERCIRESRKILGAEDLLWAMMSLGYHNYFKSLSLYLERYRYSNGIRPMQMVCEIPKPILPSCEVSQQGLPPPPPPPPPPPPPVALEANSSMNRNSSIEIAEEINIDEFWDELSNLGDD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi847g00005 219 PRINTS CCAAT-binding transcription factor subunit A signature 123 141 - -
Vivi847g00005 219 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Vivi847g00005 219 PRINTS CCAAT-binding transcription factor subunit A signature 104 122 - -
Vivi847g00005 219 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 57 121 IPR003958 -
Vivi847g00005 219 Gene3D Histone, subunit A 49 150 IPR009072 GO:0046982
Vivi847g00005 219 SUPERFAMILY Histone-fold 56 142 IPR009072 GO:0046982
Vivi847g00005 219 MobiDBLite consensus disorder prediction 1 38 - -
Vivi847g00005 219 MobiDBLite consensus disorder prediction 164 192 - -
Vivi847g00005 219 MobiDBLite consensus disorder prediction 167 186 - -
Vivi847g00005 219 MobiDBLite consensus disorder prediction 9 38 - -
Vivi847g00005 219 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 34 146 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi847g00005 48 141 CCAAT-HAP3 Transcription Factor Family AT1G21970 50.000 1.25e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Vivi847g00005 CBFD_NFYB_HMF 1.7e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi847g00005 K08065 - tpra:123912904 127.102