Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi847g00004 ATGTCTCAATCATCATCACAATCCATGTCTCAAACCACCACCCTCATCACACTCCTCTTCTTCCTCCTCCTCTTCCTCTTCCCAACCTCACTCTCCCAAAACACAACCTTCACCTTCCCCTCTTTCACCCTCCGCAACATAACCCTCCTCGGCGACTCCTTCCTCCGCAACGGCGTCGTCGGACTCACCCGCTCCACCACCGTCCCCGCTTCCTCCTCCGGCACCCTCCTCTACAACAACCCCATTTCTCACACACCCAACTCCCCTTTCTCTTTCTCCACCAACTTCACTTTCTCCATCACCAACTCAAATCCAAACCCTCCCTCTTCCTCACCCAACCACCTCTCCTTCTTCCTCAACTCCTCCACCCCTCTCATCTCCCTCGATTTCCACACCAACAACAACCAAATCAGCCTCTTTTTCAACAATTCAGTCCGAGAAACCATCGACTTCAATCTCACAAACACAAACCCGATCACTTCTTGGATTGACTACAACACTTTCAACACAAACTTCACTGTTTTCTTAACAAATTCGAGTTTTTCGAAACCCGAAAAACCTGTTTTGAATGTTGAGTTTAATCTCTCTGAGTATTTCAATGACATAGAGTTTCTCTATGTTGGGTTTTTGGGTTCTGCTTTAGGAAGTACCGAGCTTCAACAAATCATGAACTGGAGCTTTCAAACTTCTCAGTTTCCATCTCTTAATCAAACCCAAGATAAAAATTCAAGCTTTCACCATTTTGGTTATGAATATGAGGATGTTCCTGTTTCAAATTCAACAAAGAAAGGTCATGGAAAGAGATTTGTGATTGGTTTATGTGTTGCTATTGTGGGTCCATCTTTGTTCTTTGTGCTGTTTTTTGTTTTAGGGTATTTTTCTTATAGGAAATGGAGTAGTTTAAGGAAGGTTAACAAGAGTAAAAACTCTATAGGCTGTCCTACAGAGTTTGGTTACAAGGAGTTAAGGTTTGCTACAAAAGGGTTTCATGGTTCAAGGATAATTGGGAGTGGTTCATTTGGGACAGTTTATAAGGCTTTGTTTGTTTCTTCGGGAACGGTTGCGGCTGTTAAAAGATCGAGACATTCGCATGAAGGGAAGACCGAGTTTTTATCCGAGTTATCGATTATAGCTGGCTTGAGGCACAAGAATTTGGTTCAACTTTTAGGTTGGTGTGTTGAGAAAGGTGAGTTGTTGCTTGTTTATGAGTTTATGGAGAATGGGAGTTTAGATAAGTGGCTTTATAGAGAAGGTATTGAGTGTGGTGTTTTGTTGAGTTGGGTTCAAAGGTTTAACATTGTTGTTGGTTTGGCTTCTGTTTTAGCTTATTTGCATCAAGAGTGTGAGCAGAGAGTGATTCATAGAGATATTAAGACGGCGAATATATTGTTAGACAGAAATTTGAATCCGCGGTTAGGTGATTTCGGGTTGGCGAAGCTTATGGATCATGATAAGAGTCCGGTTTCGACGTTAACGGCCGGAACAATGGGATACCTAGCTCCGGAGTATCTTCAATACGGTAAAGCGACCGATAAGACCGATGTTTTTAGCTTCGGGGTCGTTGTTCTTGAGGTTGCTTGCGGTAGAAGGCCGATTGACAAAGAGGGTCAAGAGATTGTGAACTTGGTTGATTTCGTTTGGGGACTTTACGCGAAAGGGAGGATTATCGAAGCGGTTGATAAACGATTGAAGGGCGAGTTCGATGAGGTTGAAATGGAGAAGATGTTGATGTTAGGTTTGAGTTGTGCAAATCCAAATGGTGATGAAAGGCCTTCAATGAGAAGGGTTTTGCAGATTCTTAACAATGAAGGTGTGCCTCTTGTTGTGCCTAAAGTGAAACCTTGTCTTAGTTTCTCTTCTGGATTGTTGTTGACTCTTGATGAAATTGTTTCGGATTTTGATGAAAGGTTTTGTTCTAATCAATATAGTTGCAAGATTCAAATTGAACAAAGTTGTTGA 1959 0.4222 MSQSSSQSMSQTTTLITLLFFLLLFLFPTSLSQNTTFTFPSFTLRNITLLGDSFLRNGVVGLTRSTTVPASSSGTLLYNNPISHTPNSPFSFSTNFTFSITNSNPNPPSSSPNHLSFFLNSSTPLISLDFHTNNNQISLFFNNSVRETIDFNLTNTNPITSWIDYNTFNTNFTVFLTNSSFSKPEKPVLNVEFNLSEYFNDIEFLYVGFLGSALGSTELQQIMNWSFQTSQFPSLNQTQDKNSSFHHFGYEYEDVPVSNSTKKGHGKRFVIGLCVAIVGPSLFFVLFFVLGYFSYRKWSSLRKVNKSKNSIGCPTEFGYKELRFATKGFHGSRIIGSGSFGTVYKALFVSSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKGELLLVYEFMENGSLDKWLYREGIECGVLLSWVQRFNIVVGLASVLAYLHQECEQRVIHRDIKTANILLDRNLNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSFGVVVLEVACGRRPIDKEGQEIVNLVDFVWGLYAKGRIIEAVDKRLKGEFDEVEMEKMLMLGLSCANPNGDERPSMRRVLQILNNEGVPLVVPKVKPCLSFSSGLLLTLDEIVSDFDERFCSNQYSCKIQIEQSC 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi847g00004 652 Pfam Protein kinase domain 330 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi847g00004 652 ProSiteProfiles Protein kinase domain profile. 329 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi847g00004 652 SUPERFAMILY Protein kinase-like (PK-like) 313 625 IPR011009 -
Vivi847g00004 652 Gene3D Transferase(Phosphotransferase) domain 1 405 605 - -
Vivi847g00004 652 Gene3D - 32 231 - -
Vivi847g00004 652 CDD STKc_IRAK 335 602 - -
Vivi847g00004 652 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 233 IPR013320 -
Vivi847g00004 652 Gene3D Phosphorylase Kinase; domain 1 294 404 - -
Vivi847g00004 652 PANTHER - 46 603 - -
Vivi847g00004 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Vivi847g00004 652 Pfam Legume lectin domain 35 140 IPR001220 GO:0030246
Vivi847g00004 652 Pfam Legume lectin domain 144 239 IPR001220 GO:0030246
Vivi847g00004 652 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Vivi847g00004 652 SMART serkin_6 329 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi847g00004 652 FunFam L-type lectin-domain containing receptor kinase VIII.1 405 618 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi847g00004 32 635 Receptor kinase-like Gene Family AT5G55830 54.908 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi847g00004 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi847g00004 - - gmx:100808744 701.434