Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi844g00002 ATGAAGAAAAGACCATGCTTCATGCTTTGTCTCCTCATCATCTGCTTCTTTTTGCACACCTACCCTTCACTTTCTGCTTTGACCACCATCTCATCAAATCAATCTCTTTCTGGTGATCAAACTCTTGTCTCCAAAGATGGCAATTTTGAATTGGGTTTCTTCAATAGTGGTAATTCCTCTAACTATTACATAGGCATGTGGTACAAAAAAATATCTTTAAGGACATATGTTTGGGTAGCAAATAGAGATGACCCAGTTTCTGATAAAAGTGCTTCCAAGTTAGCTATTTCTGATGGTAATTTAGTTGTCTTGGATCAGTCTAAAAATCTAGTTTGGTCAACAAATTTGAGTTCTACTAGTTCAGATTCTGTATCTGCTGTCCTTTTAGATACTGGTAATCTTATATTAAGTAATAGGCCTAATGCATCAGCATCGGATGCTCTTTGGCAGAGTTTTGATTTTCCATCAGATACATGGCTTCCTGGTGGCAAAATTAAACTCGATAAGATAACTAAGAAGCCTCAATATCTTACTTCATGGAAAAACAGTGAAGATCCAGCAACTGGTTTGTTCTCTCTTGAACTAGACCCTAATGGAACCAATTCATACTTGATTCTTTGGAATAAAACTCAACAGTATTGGACAAGTGGTTCTTGGAATGGACAGATATTCAGTTTGGTTCCTGAGATGAGGTCAAACTACATCTACAATTTCACCTTTGAGAATAATGCTAACGAAAGCTACTTTACATACTCTTTGTACAGCAATTCAATTATATCTCGATTCGTGATGGATGTGTCCGGGCAGATCAAGCAATTTACTTGGCTGGAAAGTAGTCAGCAATGGAATTTATTTTGGTCACAACCAAGAGGACAGTGTCAGGTTTATGCTTTCTGTGGTGCATTTGGTAGCTGCAATGAGATCTCAAAGCCATCCTGCAACTGTTTGAATGGTTATCAACCAAAGTCACAATCTGATTGGGATCTTGGTGATTACTCAAGCGGGTGTGTGAAAACAAACAAATTTCAATGCGAGGTATCTTCTAATCCTTCTAGTGGTGCCAAAGATAGGTTCTTAACCAAATCAAATTTGGCTTTGCCTGAAAAGGCACAGCCTGTTGCGAAAGCTGGTTTGAGCGAGGAATGTGAGTCAACATGTTTGAGCAACTGTTCCTGCACCGCATATGCTTATAACAGTAGTGGTTGTTTCATTTGGAGGGGAGAACTCTTGAATCTGCAACAGCTTTCTCAAGATGACAGTAATGGACAGACATTGTTTCTCAAACTTGCAGCATCTGAGTTTCCTGATTCAAAAAGCAATAAAGGAACAACCATTGGTATTGTTGGAGGTGCTGTTGGTGGTATAGTGATTCTCCTTGTTCTTGTTCTAATTCTTGTGATTAGGCGAAGAAAGAGACTATCTGGAGCAAGAACTTCTGTGGAGGGCTCGTTGATAGCATTTGCATACAGAGATTTGCAAAATGCAACAAAGAATTTCTCAGAGAAACTCGGAGGGGGAGGTTTTGGTTCTGTTTTCAAAGGAACGTTACCTGACTCCAGTGTTATAGCAGTGAAGAAGCTTGAAAGCATTAGCCAAGGCGAGAAACAGTTCCGAACAGAAGTGAGTACTATTGGGACTGTTCAACATGTCAACCTTGTCAGGCTCCGTGGTTTCTGTTCTGAAGGCGACAAAAGGCTTCTGGTTTATGATTACATGCCAAATGGGTCTCTGGACTCACATCTATTTCAGAACTCCAAGGTGTTGGATTGGAAAATAAGATTCCAAATTGCTCTTGGAATAGCTAGAGGATTGACATATCTTCATGAAAAGTGTAGAGACTGTATCATTCACTGCGACGTGAAGCCCGAAAACATTCTCATAGATTCTGAATTTTGTCCAAAGGTAGCAGACTTCGGCCTTGCAAAGCTTGTTGGAAGGGACTTCAGCAGGGTCCTAACTACCATGAGAGGAACAAGAGGTTATTTAGCTCCGGAATGGATTTCAGGGGTGGCTATTACCGCTAAAGCCGATGTTTACAGCTACGGAATGATGCTTTTTGAGCTTGTGTCAGGTAGAAGGAACTCGGATCCTTCTGTAGACGGTCAAATTAGATTCTTTCCTACATTGGCTGCAAACACAGTACACCAAGGAGGGAATGTGATTAGCCTATTGGACTCTAGATTGGAGGGGGATGCCGATGTTGAGGAGATCACTCGAATCATAAAGATTGCTGCGTGGTGTGTTCAAGATGATGAAACTCATAGGCCATCCATGGGTCAAGTAGTTCAAATACTTGAAGGGGTGTTGGATGTTGCTTTGCCTCCAATTCCTAGATCCCTTCAAGCTTTTGTTGATGACCATGAAAACATTGTTTTCTTCACTGATTCAAGCTCCACTCATAACTCACAGGTTAAGAGCAATGTTTCAACACCCTCCTCTCAAGCTAAAAGCAACATCTCATCTACTAGCACTAGTTCTTGA 2481 0.4071 MKKRPCFMLCLLIICFFLHTYPSLSALTTISSNQSLSGDQTLVSKDGNFELGFFNSGNSSNYYIGMWYKKISLRTYVWVANRDDPVSDKSASKLAISDGNLVVLDQSKNLVWSTNLSSTSSDSVSAVLLDTGNLILSNRPNASASDALWQSFDFPSDTWLPGGKIKLDKITKKPQYLTSWKNSEDPATGLFSLELDPNGTNSYLILWNKTQQYWTSGSWNGQIFSLVPEMRSNYIYNFTFENNANESYFTYSLYSNSIISRFVMDVSGQIKQFTWLESSQQWNLFWSQPRGQCQVYAFCGAFGSCNEISKPSCNCLNGYQPKSQSDWDLGDYSSGCVKTNKFQCEVSSNPSSGAKDRFLTKSNLALPEKAQPVAKAGLSEECESTCLSNCSCTAYAYNSSGCFIWRGELLNLQQLSQDDSNGQTLFLKLAASEFPDSKSNKGTTIGIVGGAVGGIVILLVLVLILVIRRRKRLSGARTSVEGSLIAFAYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGDKRLLVYDYMPNGSLDSHLFQNSKVLDWKIRFQIALGIARGLTYLHEKCRDCIIHCDVKPENILIDSEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNSDPSVDGQIRFFPTLAANTVHQGGNVISLLDSRLEGDADVEEITRIIKIAAWCVQDDETHRPSMGQVVQILEGVLDVALPPIPRSLQAFVDDHENIVFFTDSSSTHNSQVKSNVSTPSSQAKSNISSTSTSS 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi844g00002 826 Gene3D Transferase(Phosphotransferase) domain 1 572 772 - -
Vivi844g00002 826 FunFam Serine/threonine-protein kinase 572 773 - -
Vivi844g00002 826 CDD PAN_AP_plant 351 430 - -
Vivi844g00002 826 SMART blect_4 33 155 IPR001480 -
Vivi844g00002 826 Gene3D - 24 152 IPR036426 -
Vivi844g00002 826 Pfam Protein kinase domain 500 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi844g00002 826 CDD STKc_IRAK 503 767 - -
Vivi844g00002 826 FunFam Serine/threonine-protein kinase 464 571 - -
Vivi844g00002 826 SMART serkin_6 497 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi844g00002 826 PANTHER OS07G0415500 PROTEIN 10 777 - -
Vivi844g00002 826 Pfam PAN-like domain 354 411 IPR003609 -
Vivi844g00002 826 CDD B_lectin 33 155 IPR001480 -
Vivi844g00002 826 Gene3D Phosphorylase Kinase; domain 1 464 571 - -
Vivi844g00002 826 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Vivi844g00002 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 220 IPR036426 -
Vivi844g00002 826 PIRSF SRK 1 821 IPR024171 GO:0004674
Vivi844g00002 826 ProSiteProfiles Protein kinase domain profile. 497 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi844g00002 826 Pfam D-mannose binding lectin 75 181 IPR001480 -
Vivi844g00002 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Vivi844g00002 826 FunFam Serine/threonine-protein kinase 23 152 - -
Vivi844g00002 826 MobiDBLite consensus disorder prediction 799 826 - -
Vivi844g00002 826 SUPERFAMILY Protein kinase-like (PK-like) 483 797 IPR011009 -
Vivi844g00002 826 ProSiteProfiles PAN/Apple domain profile. 344 430 IPR003609 -
Vivi844g00002 826 SMART ntp_6 353 429 IPR003609 -
Vivi844g00002 826 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Vivi844g00002 826 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi844g00002 438 771 Receptor kinase-like Gene Family AT1G56120 45.161 2.33e-79 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi844g00002 Pkinase 4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi844g00002 - - gmx:100305421 1239.56