Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi843g00002 ATGGTTGGACACAAAAACTCTCATAGATTTCATCATCTTCTTCTTCTTCTCTCATCAACTTTTTTCCTTCTCTTCACCTCAACCTCCTCCATCGACTTCATCTTCAACTCTTTCAACTCCTCAACCATCTCCCTCTTCGGAAACTCCACAATCGATTCTCATATCCTAACTCTCACACACCATCAAACCTTCTCCATCGGTCGTGCTCTCTACCCTCACAAAATCCCAACAAAAAACTCTTCATCTTCTCATGTCTACCCTTTCTCCACCTCCTTCATCTTCTCCATGGCACCTTTCAAAGACACACTTCCAGGCCATGGTTTAGTCTTCATCTTCACACCTCTCAAAGGCATCCAAGGAACAAGCTCAGCTCAACATCTTGGTCTTTTCAACCTTACCAACAACGGAGATTCGAATAACCATGTTTTCGGTGTTGAGTTTGATGTTTTCATGAACCAGGAGTTTGAAGACATCAATGATAACCATGTTGGAATTGATGTAAATTCTCTTACATCTGTTGTTTCCCATGATGCTGGGTTTTGGATTGATGATGCAAAAAGTGGAAAAGATCAGATTTTTAAGAAACTGGTGTTGAATAATGGTGAGAATTATCAGGTTTGGATTGATTATGAAGATTCTTTGATCAATGTTTCGATGGCGAAATCGGGTATGAAGAAACCTGTTAAGCCTTTGTTGAATGTTTCTGTCAATTTGTCTGATGTTTTTGAAGATGAGATGTTTGTTGGATTTACTAGCTCAACTGGGCAATTAGTTCAGAGTCATAAAATCTTGGCTTGGAGTTTTAGCAATACAAATTTTTCATTTAGTGATGAGATTATTACTATTGGTTTACCGTCTTTTGTTCTTCCGAAAGATTCAATTTTTGAGTCGAAACGGTTTGTTGCAGGGTTTAGTTTAGGAGTTTTCTTTATTGTTTGTGTTTTGGTTATGTTGGTAATGTTTTTGGTTCAGGTGAAGAGAAAGAGAGAGAAGAGGAGAAGTGAAATGGAGGATTGGGAGATGGAGTATTGGCCGCATAGAATGTCGTACGAAGAAGTTAAACGCTCGACGAAAGGTTTCTCGGAGGAGAATGTGATTGGTGTTGGTGGAAATGGGAAAGTTTATAAGGGTGTTTTAAGAGGAGGAGTTGTGATTGCGGTGAAGAATATTTCTCATGAGAATAATGGTGTGAGAGAGTTTCTTGCAGAAGTTTCGACTCTTGGAAGGTTGAAGCAAAGGAATTTAGTAGGGTTGAGAGGTTGGTGCAAGAAAAATGCTGGAAATTTCATGTTGGTTTATGACTATATGGAGAATGGAAGTTTAGATAAAAGAGTGTTTTGTGATTTTGATAATGAGAGAAAGATGTTGAGTTTTGAAGATAGAATAAGGATTCTTAAGGATGTGGCTTATGCTGTTTTGTATTTGCATGAAGGATGGGAAGTTAAGGTGGTGCATAGAGATATCAAGGCTAGCAATGTTTTACTTGATAAAGATATGAATGGAAAGTTAGGTGATTTTGGTTTAGCTAGGCTGCAAAACCATGGACAAGTAGCTAGAACGACGAAGTTGGTTGGAACGGTCGGTTACATGGCTCCTGAAGTGATAAAAACGGGCCGAGCTTCTACTCATACCGATGTTTACATGTTCGGGATCTTGATTTTGGAGGTCATGTGTGGGAGGAGACCGCTGGAAGACGGTAAACCGGGTTTGGTTGAGTTTGTTTGGAAACTTTTGGAGCAAGGGGAGCTTGTGTGTGCACTTGATGAGAGGGTGAGGGCTAAGGGGGAGTTTAGTTTGCAGGAATTGGAGAGAGTGTTGCATTTGGGTTTGTTGTGTGCTTATCCGGAGCCTAAGTCTCGGCCAAGTATGAGACAGGTGGTGAATGTTTTGGAAGGGAGGAATGAGGGAGGTGAAGAGTCGGAGAATATGGATAGTTGTTTGTTGCAACGGTTGAAGTCAAGGGATGTTTTGTCTGAGTATTCTTTGTATTTTGGTTATGCATCACACCCAACTTTTCATGATGTTCCTCAAATTTCTTCAACATCTGTTACTTGGTCTGGACCTTTAGTTGAAGGTAGGTGA 2082 0.402 MVGHKNSHRFHHLLLLLSSTFFLLFTSTSSIDFIFNSFNSSTISLFGNSTIDSHILTLTHHQTFSIGRALYPHKIPTKNSSSSHVYPFSTSFIFSMAPFKDTLPGHGLVFIFTPLKGIQGTSSAQHLGLFNLTNNGDSNNHVFGVEFDVFMNQEFEDINDNHVGIDVNSLTSVVSHDAGFWIDDAKSGKDQIFKKLVLNNGENYQVWIDYEDSLINVSMAKSGMKKPVKPLLNVSVNLSDVFEDEMFVGFTSSTGQLVQSHKILAWSFSNTNFSFSDEIITIGLPSFVLPKDSIFESKRFVAGFSLGVFFIVCVLVMLVMFLVQVKRKREKRRSEMEDWEMEYWPHRMSYEEVKRSTKGFSEENVIGVGGNGKVYKGVLRGGVVIAVKNISHENNGVREFLAEVSTLGRLKQRNLVGLRGWCKKNAGNFMLVYDYMENGSLDKRVFCDFDNERKMLSFEDRIRILKDVAYAVLYLHEGWEVKVVHRDIKASNVLLDKDMNGKLGDFGLARLQNHGQVARTTKLVGTVGYMAPEVIKTGRASTHTDVYMFGILILEVMCGRRPLEDGKPGLVEFVWKLLEQGELVCALDERVRAKGEFSLQELERVLHLGLLCAYPEPKSRPSMRQVVNVLEGRNEGGEESENMDSCLLQRLKSRDVLSEYSLYFGYASHPTFHDVPQISSTSVTWSGPLVEGR 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi843g00002 693 Gene3D Phosphorylase Kinase; domain 1 320 435 - -
Vivi843g00002 693 SUPERFAMILY Protein kinase-like (PK-like) 334 631 IPR011009 -
Vivi843g00002 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Vivi843g00002 693 CDD STKc_IRAK 366 632 - -
Vivi843g00002 693 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Vivi843g00002 693 PANTHER - 42 634 - -
Vivi843g00002 693 Gene3D Transferase(Phosphotransferase) domain 1 436 653 - -
Vivi843g00002 693 Coils Coil 322 342 - -
Vivi843g00002 693 Pfam Protein kinase domain 361 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi843g00002 693 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 322 435 - -
Vivi843g00002 693 CDD lectin_legume_LecRK_Arcelin_ConA 31 271 IPR001220 GO:0030246
Vivi843g00002 693 FunFam L-type lectin-domain containing receptor kinase S.4 29 276 - -
Vivi843g00002 693 Pfam Legume lectin domain 31 273 IPR001220 GO:0030246
Vivi843g00002 693 FunFam L-type lectin-domain containing receptor kinase S.4 436 643 - -
Vivi843g00002 693 ProSiteProfiles Protein kinase domain profile. 360 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi843g00002 693 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 280 IPR013320 -
Vivi843g00002 693 SMART serkin_6 360 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi843g00002 693 Gene3D - 28 281 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi843g00002 29 581 Receptor kinase-like Gene Family AT4G04960 64.273 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi843g00002 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi843g00002 - - gmx:100804391 1011.52