Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi836g00001 ATGAAAGCCTCAAAGCAACAAAGAAAATGCAAAGCCTTGTGTTGTAGTAGCAACAGGTTCAGTGTCTCTTCTTCAGAAGAAGCAGAAAATTCTTCTTCATCTTCATCTATCTCTGATAGGTTCCCTTCCGTTTCTACACTAGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAAGCTTGAAACTAGACATGTAGAGAGAAAAATGGAGAAGAAAAGAGAAGGAACTAAGTTTGTTGTAATGTTAGCTATGGAGAAATGTTCTTACGATCCTAGAGAAGATTTTAGGGAATCAATGATGGAGATGATAACGGCGAATCGCATTCGAGACGCGAAAGATCTTCGTAGTTTGTTGAATTATTATGTGTCGATGAATTCGGAAGAATATCATGGTCTTATACTTGAGATTTTTCATGAGGTTTGTAGTAATTTGTTCTTATCATGTAAATGCAAATGGTAA 471 0.3673 MKASKQQRKCKALCCSSNRFSVSSSEEAENSSSSSSISDRFPSVSTLAHAMVQERLDQMIREKLETRHVERKMEKKREGTKFVVMLAMEKCSYDPREDFRESMMEMITANRIRDAKDLRSLLNYYVSMNSEEYHGLILEIFHEVCSNLFLSCKCKW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi836g00001 156 NCBIfam uncharacterized plant-specific domain TIGR01568 87 149 IPR006458 -
Vivi836g00001 156 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 149 IPR038933 GO:0045892
Vivi836g00001 156 Pfam Transcriptional repressor, ovate 92 149 IPR006458 -
Vivi836g00001 156 MobiDBLite consensus disorder prediction 19 40 - -
Vivi836g00001 156 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi836g00001 Ovate 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi836g00001 - - gmx:102663136 204.142