Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi833g00005 ATGTATAATCAAGGGAATCACGGTTCGAATTCGGGACAGGGTTCAATCCCTCCACCTCCTCCTGTACTGCTGCCACCGCCACCACCACCGCCGTTGAGTTATCAGCAGGCACTGCCGCCTCCTCCACCGCCGCCTCATTTTCAGCATTTTGCCCCACCACCAGCTCCACATGTTTATTTACATGGAACCCCGCCCGTGCCAAATACTAGACCTTCATATTCCATTCCCTCTCAAATGCACCATGGAAATGGCATGGGTCAACAAACATTCCCTACCATTGGACAAAATTCCCAACATTCTTCAAATTTAGGTGTCCATAGTCATACCATTCCGCCCCCAGTTCCTCCCCCTATTGGCCACTCTCATCAGGAGACATCTTGGGCTCCTAGGCTGCCAAGTAGAGTGTTGCCACCTCCTCCCTCTTCTTCCCAAGGACAAATTTTGCTTAATCATCGTCATCTTCCTCCTCCACCACCCCCGCCCCCTTTTCATGCTCCGTCTCCTGATGGAGTTTATGGTCATTCAACTGTTGGGAATTACCACCACATGCCTTCCATTGCCCCTCCACCGTCACTACCGCCATTGCCAAGCTCTCCGCCACCGGTTCTGCCATCTCCCCCACCTCCTGCCTCTCTTATAGCTTCTACATCCTCCCAAGCTGCATGCACTGATGACCCTTACTCTAAGGAGGTTCCTAGCTTTGCATCAAAGGCTGTGGAGTCAGTAGAAGGATTTGTAGCTTCCTGTCCATCTGATACTGTGTCTGTACATAAATCTGATTCTGAAGCCAATCAAGATGTTGGAAATTGTGGTAATGTTGCTCTGGATCCCCTCAGAGATGAGCTATTGCCGACTAAAAGTGTAGTATTGGATCTTACCCCACCTCTGCCCCAGTCTGCAGAAGAAAATACTGTAAGTGCTGATTCTGACATGGAGATGGAAGATGATATCACACTTTCTGACAAAGACCAAGGATCAACTTATGCAATTGAAGGGGTAACTCTGCCGCATGATCGGGTTGATGAGGTGTTTAACATTAATGAGAAAATACAGAGGCTGCAGAGTTCAATACAAGACGAACCTGCTAAGGGCATCTTATCCAGTGGTGTATCATGCTCTGGATCCACAGGAGTCAGCAAAAAAAATGAAGGAGTAGGACCTGCATCTGATGTTGAGCCCATGAAATCTACAAGATCAGATACCAAGGTTCTTAGTCCCGCGAATGACTCAATTGAATTGGCTGAAGCCCTCCCAAGCACTGGACCGGGAAGATTGGAAGTTTCTCTAGACAAGGACTTTATAAGAAATGGTACTTCCGATCTTGGCGAAGCCACCGATCCCAACAGAGATTCTGAGCAACTTATGAGGATCGGCAGCCCGATTAGACTTCTTCAAAATTATGCTTCTGATGAAACTTCAGATAATGAAGATGGAGGTTGTACAGAAGATGCTAATAATGTTATTACAGACTCTGCAGGAGCTGATTCTTGTGTTCCGGATGCCCTTAAAGATTGCAAGAGTAATTTGGAGACTGGTCTTGGATCTAAAAGTCCCTCTTATACTGAAAAGGCGATTGGGCTGCTCTCCAAAGCATCACATAATAATTCAGAAATATCTCCATGTTTAGTACAGGAGCCCGAGGTAACCTGTAAAAGATCCATCTCACGTACTAGTGATGGGTGTGTTGCGCCTAACCTTGAAAATCAGGTGTCTGTTAATTTTGCTTCTTCAGTTGAAGCTTTACAAGTAGAAGACAGGTTAGGTGATACTGGTTTTGACATTGATAGTAAGAGTGGTACCGCTGAACAAAAACGTGAGAAGGAAACCTCAAAGTTTGAACCAACTGTTCTAAAAGTAGATGAATTCGGGAGGCATATCAGAGACGATGCTTCAGATAGCGGCTCTGATGAATCTCGCAGTCATCGGACTAAGAGGACGAACAAAAGAGATAGAAGCCGGAGTCGCAGCCGGTCTCGATCTCCCATTGACAGAAGAAGTAGGAGAAGAAGAAGAAGTCCTCGGAGGAGAAAGCATAAAAGAAGCCTCTCTCGCAGCTGGTCTCCTCGGCGGCGTAGAAGCAGGAGTAGGTCTCCAATCTTAAGACGTTCAGGTGACACTCATGGGGAAAATGTGAGAAGGGACAAGGATCAATGCTATGATTTCTTACGTAAAAGGTGCTATCGTGGAGCATTATGTAGGTTTGCGCATCATGAATCTGACAGGAGTGCTACTTCAAGGCACTCCAGGAATAAACATGATCTGGAACTTGATTCTCGTGAAAAAAGTTCTAGGGTTAATGAAGAAGTTAAGAGTATTTCTTCTAAAGTGTCAGATTATGAGCATGATGGAGTCAGAAATCAGGACACAGATCTTCACCAGAATATAACTGGCCAGGAAGTAGTGCAAAGAAAGGAAGATTCTGAGGGCCACGCCGTTGTGTCTACTACCTTTGGTATCGATGGTCAATCGTTTAACAGCATTCCAAGTTCTGAATGTGTTAGAGAGGTTTCTCCTAAGGTGCATGAAACCTTAGTAGTTGGAGAAAAGCCCAAGACTTCATTACATGAAAGTGGTAGTTTTCAGAATGCATTAAGTTCTCATCAGCAGCACTTAGTTGATGACTTTCAGCCTGAAGCTTTAATTCATGCTGATGCTTCTATACCATCTGGTAGTGCATCTAAAGATGTTATTCCATCAGAAGATGGTTCAGTTGTTCAGCAACTACAATCCAATGTTTCTGTTGAAGTTCCAGAACATTCTGGTGGTACATCTAAAGATGTTCTTCTTTCAGATGATGGTTCATTTGTTCAGCATCTACCATCCAATGTATCTGTTGGAGTTCCAGAACATTCTGGTTACCCATCTCAGCTTCTAAATGTGGCCGGTGCGACTGATTTGTCATCTGATAAAAGTTCTGCTAATGAGGTTTCTGGTAGTGAACCTTTACCATTTACGTTACCATCTACACAACTACACTCGGCCACTAGTTCTATTGGTCCATGTGTAGCATCAGAGCAGCCTTCATTGCACCCTCAGGGTTTTAAAGAGTTACCTCCAATAAGTGTTTCATCGGTGCAAATCCCTCTTCATACTTACCCATTGCCAGCCTTTGCTGGTTCACATTTCCAGGGTGAAAATGCCGGGCATATGCCACAAATTCCAAGGCAATATGGTGTGGCGCAGCAAAATGCATTATTTCCTTTCCAATCTCCTTACCCACCTTCGTTACAGACACCAAATTCTCATTTCAGTGTACCGCCTCATAGCTCTTGGACATCATTGCCGCTGCCACCGCCGCCTCCACCACCATCACAGGCCGTGTATAATTCCAGTTCTAACTTGGGAGTTACAAAATCTTTTATTTCTTCCGAATTTAATCAGAATCAACTGCATTCAAGATCTGATTATGTTTCCCAGACTTCCTTGATTCATGGGTTACCATCTAATTCTCAAAATTCGAAGTTTGAAGATCAACCTTACCCTCCAATGCAGGACCATTCACAAACCTTTGTGCGTACAGAACCTCTATCTCCCAAGCATCTTCATCAGGGGAACCCGGCATACCAATCACTTTCAAGCTCCACATCTTTTGGTGGCCTGCATCATCAACCAAAACAATTTTCCTGGGAGTCAGATGTGAACAGACCACAACCTTCTTTGGGCGGCAGGTTGCCTCCTGAAGGAAATTTCAGCACTTCCTCCCACATTCATCCATTATCACAGCAACAACAATCAGTTCATAATTTTCAATATGCTTCATCTGATGTTAATTTGCCCGGACCTGGAGGAACTGCTACTGTATCCAGATATCCACCAGATATTCCTGATAGCAACCATTCAACTTCTCTTCCGGCTTTTGGACCATCAAGAGTTTCTGCCCACTATAATCCTTATGCATCAACCTTTGAGCAGCCGCTAAGTTCAAAATTCAGTTCTAGCTTTTTACGACAAGAAAATGATATAGTTTATGGTAAAAATTATGGTCCTTCTAGATATAGGGAAGGGGATAGTGTTGGATCAAGGCATACAGCATCGCCCAAACCAGCAGCAGCTGTTGGTCGGATCTTGCCAGGGTCTGGTGAACAATATGATCCACTTTTTGACAGCATTGAACCATCATCATCTTTGAAGAAATTTGATTTTGAGCAGAAGCAGGAAGTTACAGGTGAATCCAATTTCAGCCTAAGGCCTAAAAGTTCTCATATGTCTTTGGATGCCAAAGAGAAGAAGCATGAGAAGGTTGGGGCTGTTGCCTCTACCAGTTCTCTAAATAATGATGAATATGGGGAGACAGCAGATGCCGAGGTGGGTGCTGTTGACAATGAAAGCCTAAGTAATGATGTAGATGTTGCAAACATGTCTCCGGAGGAGGATGAGATTAATCAGACCAAATCTCCAGGGAAAAGAAAGAAGAGCAAGGATTCTAGATCAATGAAATTATTCAAAGTTTCCATTGCAAACTTTGTAAAAGAGGTTTTGAAACCATCATGGCGACAGGGTAATATGAGTAAGGTGGCTTTCAAAACCATTGTGAAAAAGACCGTAGACAAGGTGTCGGGAGCCATGAAAGGCCATCGTATACCCAAATCTCAAGAGAAGATAAGTCAATATATTGACTCATCACAGCGGAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGGTGTGA 4680 0.4417 MYNQGNHGSNSGQGSIPPPPPVLLPPPPPPPLSYQQALPPPPPPPHFQHFAPPPAPHVYLHGTPPVPNTRPSYSIPSQMHHGNGMGQQTFPTIGQNSQHSSNLGVHSHTIPPPVPPPIGHSHQETSWAPRLPSRVLPPPPSSSQGQILLNHRHLPPPPPPPPFHAPSPDGVYGHSTVGNYHHMPSIAPPPSLPPLPSSPPPVLPSPPPPASLIASTSSQAACTDDPYSKEVPSFASKAVESVEGFVASCPSDTVSVHKSDSEANQDVGNCGNVALDPLRDELLPTKSVVLDLTPPLPQSAEENTVSADSDMEMEDDITLSDKDQGSTYAIEGVTLPHDRVDEVFNINEKIQRLQSSIQDEPAKGILSSGVSCSGSTGVSKKNEGVGPASDVEPMKSTRSDTKVLSPANDSIELAEALPSTGPGRLEVSLDKDFIRNGTSDLGEATDPNRDSEQLMRIGSPIRLLQNYASDETSDNEDGGCTEDANNVITDSAGADSCVPDALKDCKSNLETGLGSKSPSYTEKAIGLLSKASHNNSEISPCLVQEPEVTCKRSISRTSDGCVAPNLENQVSVNFASSVEALQVEDRLGDTGFDIDSKSGTAEQKREKETSKFEPTVLKVDEFGRHIRDDASDSGSDESRSHRTKRTNKRDRSRSRSRSRSPIDRRSRRRRRSPRRRKHKRSLSRSWSPRRRRSRSRSPILRRSGDTHGENVRRDKDQCYDFLRKRCYRGALCRFAHHESDRSATSRHSRNKHDLELDSREKSSRVNEEVKSISSKVSDYEHDGVRNQDTDLHQNITGQEVVQRKEDSEGHAVVSTTFGIDGQSFNSIPSSECVREVSPKVHETLVVGEKPKTSLHESGSFQNALSSHQQHLVDDFQPEALIHADASIPSGSASKDVIPSEDGSVVQQLQSNVSVEVPEHSGGTSKDVLLSDDGSFVQHLPSNVSVGVPEHSGYPSQLLNVAGATDLSSDKSSANEVSGSEPLPFTLPSTQLHSATSSIGPCVASEQPSLHPQGFKELPPISVSSVQIPLHTYPLPAFAGSHFQGENAGHMPQIPRQYGVAQQNALFPFQSPYPPSLQTPNSHFSVPPHSSWTSLPLPPPPPPPSQAVYNSSSNLGVTKSFISSEFNQNQLHSRSDYVSQTSLIHGLPSNSQNSKFEDQPYPPMQDHSQTFVRTEPLSPKHLHQGNPAYQSLSSSTSFGGLHHQPKQFSWESDVNRPQPSLGGRLPPEGNFSTSSHIHPLSQQQQSVHNFQYASSDVNLPGPGGTATVSRYPPDIPDSNHSTSLPAFGPSRVSAHYNPYASTFEQPLSSKFSSSFLRQENDIVYGKNYGPSRYREGDSVGSRHTASPKPAAAVGRILPGSGEQYDPLFDSIEPSSSLKKFDFEQKQEVTGESNFSLRPKSSHMSLDAKEKKHEKVGAVASTSSLNNDEYGETADAEVGAVDNESLSNDVDVANMSPEEDEINQTKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRIPKSQEKISQYIDSSQRKLTKLVMGYVDKYVKV 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1451 1476 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1401 1415 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 965 1003 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 589 643 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 152 167 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1070 1105 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1070 1090 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 72 107 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 367 486 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1326 1357 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 186 211 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1192 1215 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1192 1220 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1387 1429 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 737 776 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 14 61 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1 229 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 965 1015 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 644 697 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 1091 1105 - -
Vivi833g00005 1559 PRINTS Proline rich extensin signature 40 56 - -
Vivi833g00005 1559 PRINTS Proline rich extensin signature 155 171 - -
Vivi833g00005 1559 PRINTS Proline rich extensin signature 184 209 - -
Vivi833g00005 1559 PRINTS Proline rich extensin signature 19 31 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 292 312 - -
Vivi833g00005 1559 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 303 1558 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 465 486 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 367 382 - -
Vivi833g00005 1559 MobiDBLite consensus disorder prediction 589 711 - -
Vivi833g00005 1559 ProSiteProfiles Zinc finger C3H1-type profile. 712 739 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vivi833g00005 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi833g00005 - - cam:101503336 1998.02