Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi833g00004 ATGTATAATCAAGGGAATCACGGTTCGAATTCGGGACAGGGTTCAATCCCTCCACCTCCTCCTGTACTGCTGCCACCGCCACCACCACCGCCGTTGAGTTATCAGCAGGCACTGCCGCCTCCTCCACCGCCGCCTCATTTTCAGCATTTTGCCCCACCACCAGCTCCACATGTTTATTTACATGGAACCCCGCCCGTGCCAAATACTAGACCTTCATATTCCATTCCCTCTCAAATGCACCATGGAAATGGCATGGGTCAACAAACATTCCCTACCATTGGACAAAATTCCCAACATTCTTCAAATTTAGGTGTCCATAGTCATACCATTCCGCCCCCAGTTCCTCCCCCTATTGGCCACTCTCATCAGGAGACATCTTGGGCTCCTAGGCTGCCAAGTAGAGTGTTGCCACCTCCTCCCTCTTCTTCCCAAGGACAAATTTTGCTTAATCATCGTCATCTTCCTCCTCCACCACCCCCGCCCCCTTTTCATGCTCCGTCTCCTGATGGAGTTTATGGTCATTCAACTGTTGGGAATTACCACCACATGCCTTCCATTGCCCCTCCACCGTCACTACCGCCATTGCCAAGCTCTCCGCCACCGGTTCTGCCATCTCCCCCACCTCCTGCCTCTCTTATAGCTTCTACATCCTCCCAAGCTGCATGCACTGATGACCCTTACTCTAAGGAGGTTCCTAGCTTTGCATCAAAGGCTGTGGAGTCAGTAGAAGGATTTGTAGCTTCCTGTCCATCTGATACTGTGTCTGTACATAAATCTGATTCTGAAGCCAATCAAGATGTTGGAAATTGTGGTAATGTTGCTCTGGATCCCCTCAGAGATGAGCTATTGCCGACTAAAAGTGTAGTATTGGATCTTACCCCACCTCTGCCCCAGTCTGCAGAAGAAAATACTGTAAGTGCTGATTCTGACATGGAGATGGAAGGAGTAGGACCTGCATCTGATGTTGAGCCCATGAAATCTACAAGATCAGATACCAAGGTTCTTAGTCCCGCGAATGACTCAATTGAATTGGCTGAAGCCCTCCCAAGCACTGGACCGGGAAGATTGGAAGTTTCTCTAGACAAGGACTTTATAAGAAATGGTACTTCCGATCTTGGCGAAGCCACCGATCCCAACAGAGATTCTGAGCAACTTATGAGGATCGGCAGCCCGATTAGACTTCTTCAAAATTATGCTTCTGATGAAACTTCAGATAATGAAGATGGAGGTTGTACAGAAGATGCTAATAATGTTATTACAGACTCTGCAGGAGCTGATTCTTGTGTTCCGGATGCCCTTAAAGATTGCAAGAGTAATTTGGAGACTGGTCTTGGATCTAAAAGTCCCTCTTATACTGAAAAGGCGATTGGGCTGCTCTCCAAAGCATCACATAATAATTCAGAAATATCTCCATGTTTAGTACAGGAGCCCGAGGTAACCTGTAAAAGATCCATCTCACGTACTAGTGATGGGTGTGTTGCGCCTAACCTTGAAAATCAGGTGTCTGTTAATTTTGCTTCTTCAGTTGAAGCTTTACAAGTAGAAGACAGGTTAGGTGATACTGGTTTTGACATTGATAGTAAGAGTGGTACCGCTGAACAAAAACGTGAGAAGGAAACCTCAAAGTTTGAACCAACTGTTCTAAAAGTAGATGAATTCGGGAGGCATATCAGAGACGATGCTTCAGATAGCGGCTCTGATGAATCTCGCAGTCATCGGACTAAGAGGACGAACAAAAGAGATAGAAGCCGGAGTCGCAGCCGGTCTCGATCTCCCATTGACAGAAGAAGTAGGAGAAGAAGAAGAAGTCCTCGGAGGAGAAAGCATAAAAGAAGCCTCTCTCGCAGCTGGTCTCCTCGGCGGCGTAGAAGCAGGAGTAGGTCTCCAATCTTAAGACGTTCAGGTGACACTCATGGGGAAAATGTGAGAAGGGACAAGGATCAATGCTATGATTTCTTACGTAAAAGGTGCTATCGTGGAGCATTATGTAGGTTTGCGCATCATGAATCTGACAGGAGTGCTACTTCAAGGCACTCCAGGAATAAACATGATCTGGAACTTGATTCTCGTGAAAAAAGTTCTAGGGTTAATGAAGAAGTTAAGAGTATTTCTTCTAAAGTGTCAGATTATGAGCATGATGGAGTCAGAAATCAGGACACAGATCTTCACCAGAATATAACTGGCCAGGAAGTAGTGCAAAGAAAGGAAGATTCTGAGGGCCACGCCGTTGTGTCTACTACCTTTGGTATCGATGGTCAATCGTTTAACAGCATTCCAAGTTCTGAATGTGTTAGAGAGGTTTCTCCTAAGGTGCATGAAACCTTAGTAGTTGGAGAAAAGCCCAAGACTTCATTACATGAAAGTGGTAGTTTTCAGAATGCATTAAGTTCTCATCAGCAGCACTTAGTTGATGACTTTCAGCCTGAAGCTTTAATTCATGCTGATGCTTCTATACCATCTGGTAGTGCATCTAAAGATGTTATTCCATCAGAAGATGGTTCAGTTGTTCAGCAACTACAATCCAATGTTTCTGTTGAAGTTCCAGAACATTCTGGTGGTACATCTAAAGATGTTCTTCTTTCAGATGATGGTTCATTTGTTCAGCATCTACCATCCAATGTATCTGTTGGAGTTCCAGAACATTCTGGTTACCCATCTCAGCTTCTAAATGTGGCCGGTGCGACTGATTTGTCATCTGATAAAAGTTCTGCTAATGAGGTTTCTGGTAGTGAACCTTTACCATTTACGTTACCATCTACACAACTACACTCGGCCACTAGTTCTATTGGTCCATGTGTAGCATCAGAGCAGCCTTCATTGCACCCTCAGGGTTTTAAAGAGTTACCTCCAATAAGTGTTTCATCGGTGCAAATCCCTCTTCATACTTACCCATTGCCAGCCTTTGCTGGTTCACATTTCCAGGGTGAAAATGCCGGGCATATGCCACAAATTCCAAGGCAATATGGTGTGGCGCAGCAAAATGCATTATTTCCTTTCCAATCTCCTTACCCACCTTCGTTACAGACACCAAATTCTCATTTCAGTGTACCGCCTCATAGCTCTTGGACATCATTGCCGCTGCCACCGCCGCCTCCACCACCATCACAGGCCGTGTATAATTCCAGTTCTAACTTGGGAGTTACAAAATCTTTTATTTCTTCCGAATTTAATCAGAATCAACTGCATTCAAGATCTGATTATGTTTCCCAGACTTCCTTGATTCATGGGTTACCATCTAATTCTCAAAATTCGAAGTTTGAAGATCAACCTTACCCTCCAATGCAGGACCATTCACAAACCTTTGTGCGTACAGAACCTCTATCTCCCAAGCATCTTCATCAGGGGAACCCGGCATACCAATCACTTTCAAGCTCCACATCTTTTGGTGGCCTGCATCATCAACCAAAACAATTTTCCTGGGAGTCAGATGTGAACAGACCACAACCTTCTTTGGGCGGCAGGTTGCCTCCTGAAGGAAATTTCAGCACTTCCTCCCACATTCATCCATTATCACAGCAACAACAATCAGTTCATAATTTTCAATATGCTTCATCTGATGTTAATTTGCCCGGACCTGGAGGAACTGCTACTGTATCCAGATATCCACCAGATATTCCTGATAGCAACCATTCAACTTCTCTTCCGGCTTTTGGACCATCAAGAGTTTCTGCCCACTATAATCCTTATGCATCAACCTTTGAGCAGCCGCTAAGTTCAAAATTCAGTTCTAGCTTTTTACGACAAGAAAATGATATAGTTTATGGTAAAAATTATGGTCCTTCTAGATATAGGGAAGGGGATAGTGTTGGATCAAGGCATACAGCATCGCCCAAACCAGCAGCAGCTGTTGGTCGGATCTTGCCAGGGTCTGGTGAACAATATGATCCACTTTTTGACAGCATTGAACCATCATCATCTTTGAAGAAATTTGATTTTGAGCAGAAGCAGGAAGTTACAGGTGAATCCAATTTCAGCCTAAGGCCTAAAAGTTCTCATATGTCTTTGGATGCCAAAGAGAAGAAGCATGAGAAGGTTGGGGCTGTTGCCTCTACCAGTTCTCTAAATAATGATGAATATGGGGAGACAGCAGATGCCGAGGTGGGTGCTGTTGACAATGAAAGCCTAAGTAATGATGTAGATGTTGCAAACATGTCTCCGGAGGAGGATGAGATTAATCAGACCAAATCTCCAGGGAAAAGAAAGAAGAGCAAGGATTCTAGATCAATGAAATTATTCAAAGTTTCCATTGCAAACTTTGTAAAAGAGGTTTTGAAACCATCATGGCGACAGGGTAATATGAGTAAGGTGGCTTTCAAAACCATTGTGAAAAAGACCGTAGACAAGGTGTCGGGAGCCATGAAAGGCCATCGTATACCCAAATCTCAAGAGAAGATAAGTCAATATATTGACTCATCACAGCGGAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGGTGTGA 4473 0.4427 MYNQGNHGSNSGQGSIPPPPPVLLPPPPPPPLSYQQALPPPPPPPHFQHFAPPPAPHVYLHGTPPVPNTRPSYSIPSQMHHGNGMGQQTFPTIGQNSQHSSNLGVHSHTIPPPVPPPIGHSHQETSWAPRLPSRVLPPPPSSSQGQILLNHRHLPPPPPPPPFHAPSPDGVYGHSTVGNYHHMPSIAPPPSLPPLPSSPPPVLPSPPPPASLIASTSSQAACTDDPYSKEVPSFASKAVESVEGFVASCPSDTVSVHKSDSEANQDVGNCGNVALDPLRDELLPTKSVVLDLTPPLPQSAEENTVSADSDMEMEGVGPASDVEPMKSTRSDTKVLSPANDSIELAEALPSTGPGRLEVSLDKDFIRNGTSDLGEATDPNRDSEQLMRIGSPIRLLQNYASDETSDNEDGGCTEDANNVITDSAGADSCVPDALKDCKSNLETGLGSKSPSYTEKAIGLLSKASHNNSEISPCLVQEPEVTCKRSISRTSDGCVAPNLENQVSVNFASSVEALQVEDRLGDTGFDIDSKSGTAEQKREKETSKFEPTVLKVDEFGRHIRDDASDSGSDESRSHRTKRTNKRDRSRSRSRSRSPIDRRSRRRRRSPRRRKHKRSLSRSWSPRRRRSRSRSPILRRSGDTHGENVRRDKDQCYDFLRKRCYRGALCRFAHHESDRSATSRHSRNKHDLELDSREKSSRVNEEVKSISSKVSDYEHDGVRNQDTDLHQNITGQEVVQRKEDSEGHAVVSTTFGIDGQSFNSIPSSECVREVSPKVHETLVVGEKPKTSLHESGSFQNALSSHQQHLVDDFQPEALIHADASIPSGSASKDVIPSEDGSVVQQLQSNVSVEVPEHSGGTSKDVLLSDDGSFVQHLPSNVSVGVPEHSGYPSQLLNVAGATDLSSDKSSANEVSGSEPLPFTLPSTQLHSATSSIGPCVASEQPSLHPQGFKELPPISVSSVQIPLHTYPLPAFAGSHFQGENAGHMPQIPRQYGVAQQNALFPFQSPYPPSLQTPNSHFSVPPHSSWTSLPLPPPPPPPSQAVYNSSSNLGVTKSFISSEFNQNQLHSRSDYVSQTSLIHGLPSNSQNSKFEDQPYPPMQDHSQTFVRTEPLSPKHLHQGNPAYQSLSSSTSFGGLHHQPKQFSWESDVNRPQPSLGGRLPPEGNFSTSSHIHPLSQQQQSVHNFQYASSDVNLPGPGGTATVSRYPPDIPDSNHSTSLPAFGPSRVSAHYNPYASTFEQPLSSKFSSSFLRQENDIVYGKNYGPSRYREGDSVGSRHTASPKPAAAVGRILPGSGEQYDPLFDSIEPSSSLKKFDFEQKQEVTGESNFSLRPKSSHMSLDAKEKKHEKVGAVASTSSLNNDEYGETADAEVGAVDNESLSNDVDVANMSPEEDEINQTKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRIPKSQEKISQYIDSSQRKLTKLVMGYVDKYVKV 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 368 417 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 520 642 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1332 1346 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 152 167 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1382 1407 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 520 574 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 396 417 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 896 934 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 72 107 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 252 268 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 186 211 - -
Vivi833g00004 1490 ProSiteProfiles Zinc finger C3H1-type profile. 643 670 IPR000571 GO:0046872
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 668 707 - -
Vivi833g00004 1490 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 303 1489 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1257 1288 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1001 1021 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1001 1036 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 251 270 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 14 61 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 290 338 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1 229 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1318 1360 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1022 1036 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1123 1146 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 575 628 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 896 946 - -
Vivi833g00004 1490 MobiDBLite consensus disorder prediction 1123 1151 - -
Vivi833g00004 1490 PRINTS Proline rich extensin signature 184 209 - -
Vivi833g00004 1490 PRINTS Proline rich extensin signature 40 56 - -
Vivi833g00004 1490 PRINTS Proline rich extensin signature 19 31 - -
Vivi833g00004 1490 PRINTS Proline rich extensin signature 155 171 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vivi833g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi833g00004 - - mtr:11418571 1657.5