Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi830g00007 ATGGCATCTTCAAATTCACCATGTGCAGCATGCAAGTTTCTACGCCGCAAATGCCAACCAGAATGTGCATTTGCACCTTATTTTCCACCTGATCAGCCACAAAAATTTGCGAATGTTCATAGAATTTTTGGGGCAAGTAATGTTACAAAGCTTCTCAATGATTTACACCCTCACCAACGTGAAGATGCTGTTAATTCTCTTGCTTATGAGGCTGAGATGCGACTTCGTGATCCCGTTTACGGTTGCGTCGGTGTAATTTCTCTCCTTCAACATCAACTTCGGCAGCTTCAGATGGATCTTTATTGGGCGAAATCGGAACTCTCACGGTACCAGAACTTAAGCATCGCAGCAGCCACGACAGGTCTTCTAACTGGGGACTCTGTCACGGCCGCTGCGACTAATTACCACCACCACACGCAGAACACTGGGAGTGTTGGTGGTGGTGGTAATAATAGTAACGGTAACGGCCGTGATAATAATAACCATCATTTTCATCTTCAGCACCATCACCATCATCAGTTTTTTCCTAGAGATCAGCATCAGCAACATAATTTGGTGGTTAGAAACTTTGATGCTGGAATTGGAAACAACTATGATGCGAGTCTTTTGGCTATGAATATTTCTGCTAGCTTAGGGCAGATCAATCAGCTTCAACATCATAGTGCCGCCGGTGGTGGTGGTGATGACCGCCGTACTGTTAACCGCTCCTAG 711 0.4529 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYWAKSELSRYQNLSIAAATTGLLTGDSVTAAATNYHHHTQNTGSVGGGGNNSNGNGRDNNNHHFHLQHHHHHQFFPRDQHQQHNLVVRNFDAGIGNNYDASLLAMNISASLGQINQLQHHSAAGGGGDDRRTVNRS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi830g00007 236 MobiDBLite consensus disorder prediction 138 176 - -
Vivi830g00007 236 MobiDBLite consensus disorder prediction 138 160 - -
Vivi830g00007 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 165 - -
Vivi830g00007 236 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Vivi830g00007 236 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi830g00007 2 236 AS2 family AT1G65620 59.149 9.32e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi830g00007 LOB 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi830g00007 - - vvo:131618504 410.609