Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi830g00006 ATGAGTTCCGTCCAAATTCTTTCCACCACAATAATTCAAGCACCAAATCACAATCTCAATCTCTCAAATCATCATACAATCGATCTAACCCCATGGGATCTTCAATATCTCCCATTTGGATACAATCAAATCGGTCTTATTTATCAACACAATTCTGAATTAGATACAGAAAATCAAATCCAGCATCTTAAACAATCTCTTTCCTCTACCCTTGAATTTTTTCCACCTTTCACAGGTCGTCTCGATATCACGGAACACGAAGATAACACTATCTCTTGTTCCATCAAATGCAACAACGAAGGTGCACTCTTTGTTCACGCCGCAAATAAAAATATTAGTGTAAGAGACATTCTTGGACCAACTTATCTTCCAGATATTTTTTATTCATTTTTTCAGCTTAACGGAGTTAAGAATTACCAAGGGACGTCACATCCATTACTGGCGATCCAAGTAACTGAGTTAACCGATGGCATCGTTATTGGCTGTGCAATCAGTCATGTGGTAGTTGATGGTACTTCTCTTTGGCATTTCATCAATTCATGGGCCAAAATATCAAAGGGTAATTTCGAAATTTCCAAAATTCCATCGTTGGAACGATGGTTTTCGAATGATATTCAACGTCCAATCCGATTTCATTTCCCAATAGAACCACATAATAGGCTCTCTAATAATCAAAATGATGAAGAGGAAAAACTCAAGGCACCGATGTCGGAGAGATTATTTCATTTGTCTAAAGAGAATATTGCAAAACTAAAATCCAAAGCCAATTTAGAGGCTGGTACAAAAAACATATCGTCTCTGCAAGCCGTTTTCACTCACGTTTGGCGCTGTATTATACGTTCCAAGAACCTTGATCCGCAAGAAAAATTGAATTTCGTGATAGATATAGGCGTTAGACCAAGGTTTATTCCTCCGTTACCAGAGGAATATTTTGGTAATGCTGTGATGGAGTGTGTGGTTACTGTGAAAGTCGGTGAATTATTGGAAGATGGTGGACTTGGTAAATGTGCTTTGAAGATGAACAAGATAATTGCTCTGCACTCTGATGAGAAGTTAAAGAATCATTATGAAGATTGGTTAATTGCACCGAGTTTTGTTTTTAACGACGGTGATGTGGGAAATAGTAATTCATTGGCGATTGGTAGTTCGCCTTGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAACCTGTGGCGGTAAGAAATGGGGGTGCAAATAAAAAAAATGGAAAGATTTATGTTTCTGCTGGTATTGAAGAAGGTAGTATAAACCTTGAAGTATGTCTTGATTATGAAATTTTGGAGGCAATTGGAAATGATTATGAGTTTATGGATGATGTGTGTAGCTAA 1353 0.3725 MSSVQILSTTIIQAPNHNLNLSNHHTIDLTPWDLQYLPFGYNQIGLIYQHNSELDTENQIQHLKQSLSSTLEFFPPFTGRLDITEHEDNTISCSIKCNNEGALFVHAANKNISVRDILGPTYLPDIFYSFFQLNGVKNYQGTSHPLLAIQVTELTDGIVIGCAISHVVVDGTSLWHFINSWAKISKGNFEISKIPSLERWFSNDIQRPIRFHFPIEPHNRLSNNQNDEEEKLKAPMSERLFHLSKENIAKLKSKANLEAGTKNISSLQAVFTHVWRCIIRSKNLDPQEKLNFVIDIGVRPRFIPPLPEEYFGNAVMECVVTVKVGELLEDGGLGKCALKMNKIIALHSDEKLKNHYEDWLIAPSFVFNDGDVGNSNSLAIGSSPWFDVYGNDFGWGKPVAVRNGGANKKNGKIYVSAGIEEGSINLEVCLDYEILEAIGNDYEFMDDVCS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi830g00006 450 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 445 - -
Vivi830g00006 450 Pfam Transferase family 4 445 - -
Vivi830g00006 450 Gene3D - 4 210 IPR023213 -
Vivi830g00006 450 Gene3D - 216 439 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi830g00006 61 433 Monolignol Biosynthesis Gene Families AT5G48930 26.053 6.17e-30 119