Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi829g00001 ATGAACCTGCCTCTAAGCCGGTTGTTATTTGGCTTCTCGGACTCTGCCGTGGGAGAAGGAGCATTTGGTCAGCATGGGCCGTTTAGACCCACCATGAGGGGTTTGGTCAAAAACCCCTACAGTTGGAATAAAGCGGCAAACCTGCTGTATCTTGATTCTCCTGCTGGGGTTGGTTTTTCTTACTCAACCAACCTTTCAGACTATTTGCTTGTTACGGATGAAATGGCTGCGAGGGATCACCTTGTTTTCCTTCAGCATTGGTTCAACAAATTCCCAGAGTTTAAGACCAATGAATTCTTCATCGCAGGACAGGGCTATGCTGGTCACTTTGCACCTCAGCTTGCCCAACTCATCCTCGAAACTAAATCCGAAATAAATTTGAAGGGGATTGCTATAGGAAATCCTCTTTTGGACTATGATAATGACTACAACTCGACGGCTGATTTTTTATGGAGCCATGCACAAATATCGGACTTAACATATTGGAAGCTTAAGAATAAATGTGGTTATGCATCTATTACAAAGGAGTATATCACTGAGAAATCTACTAAAGCTTGCCAGGATACTAATACAAAGATGTCCATAGAAGTGAATGGTTATACCAACTCATTCAATGTGTATGCTAACACTTGTCCAGCCGCACCAGAAAATGAAGAATACCTCCAGCAAACCGGAGAAAAAGCTTATGTATGCACTAGAGATGCAACTAATGCATACATGGATAAACAAGAAACTTTAAAAGCTTTGCATGCATCACTGGTAGGAATTCAAAAATGGTCCATTTGCAGCAAGGTTCTCTACTATAATCCCTATGAGCAGTTCAACCCAACCATCAATTTACTAGGGACACTTGTTAGATCAGGGGTTAGGATACTAGTATTCAGTGGTGATAGTGATTCCGTCATTCCATTTATGGGGACACGGTCCTTAATACGTGAAATGGCGGAGGATTTTGGGTTCAGGACTACAAGGGATTATCAAGCCTGGTTTCAAGATGGACAGGTCGCTGGATGGAGCCAAGTTTTTGAAGACATCCTAACATATGCTACAATATTAGGAGAAGGACATTCAGATGGAGTTTCTCAACCGAAGAATTCGCTTCTGATGCTGAAGACTTTTTTGGAAGGAAAACCACTTCCAGAAAGGCACCCTTTTCCTAAGAATGGGCATAAAAATTAA 1179 0.419 MNLPLSRLLFGFSDSAVGEGAFGQHGPFRPTMRGLVKNPYSWNKAANLLYLDSPAGVGFSYSTNLSDYLLVTDEMAARDHLVFLQHWFNKFPEFKTNEFFIAGQGYAGHFAPQLAQLILETKSEINLKGIAIGNPLLDYDNDYNSTADFLWSHAQISDLTYWKLKNKCGYASITKEYITEKSTKACQDTNTKMSIEVNGYTNSFNVYANTCPAAPENEEYLQQTGEKAYVCTRDATNAYMDKQETLKALHASLVGIQKWSICSKVLYYNPYEQFNPTINLLGTLVRSGVRILVFSGDSDSVIPFMGTRSLIREMAEDFGFRTTRDYQAWFQDGQVAGWSQVFEDILTYATILGEGHSDGVSQPKNSLLMLKTFLEGKPLPERHPFPKNGHKN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi829g00001 392 Pfam Serine carboxypeptidase 18 376 IPR001563 GO:0004185|GO:0006508
Vivi829g00001 392 PRINTS Carboxypeptidase C serine protease (S10) family signature 346 359 IPR001563 GO:0004185|GO:0006508
Vivi829g00001 392 PRINTS Carboxypeptidase C serine protease (S10) family signature 87 112 IPR001563 GO:0004185|GO:0006508
Vivi829g00001 392 PRINTS Carboxypeptidase C serine protease (S10) family signature 38 50 IPR001563 GO:0004185|GO:0006508
Vivi829g00001 392 PRINTS Carboxypeptidase C serine protease (S10) family signature 51 61 IPR001563 GO:0004185|GO:0006508
Vivi829g00001 392 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 360 IPR001563 GO:0004185|GO:0006508
Vivi829g00001 392 SUPERFAMILY alpha/beta-Hydrolases 19 380 IPR029058 -
Vivi829g00001 392 Gene3D alpha/beta hydrolase 11 383 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi829g00001 239 379 Calmodulin-binding Proteins AT2G22960 29.054 1.04e-15 73.2