Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi827g00013 ATGGAGTTTGATAATGACGGGGCTTCCGATCTTCCACCGGTGGCACCCGAAGGATCCGGCGACGGTTTACCTTATGCACCAGAAAATTTTCCGAACCCCGGCGACATTTGGCGGTGGAAAGCTGGCCAGAGGATTTCGTCCAACGGTAACTTTAGGGACCGGTATCTGTATCTTCCTCGGCGTATTGCTGCCTCTCACCGCGGTGGATTCAAAAGCAAGCTTGCTGTTGAACGCTACGTCAAAGAATTCTTCCCTGACGCTAGTCTTGTTGATTTCTTTGCTTCTTTCAGCTGGAGCATTCCCTCTGGTCTTCCTGGCAATATGAATCCTGTTGCTGCAGCTGATGGACTTCTTCGTCAGTTAGAATTGAAACAGCAGCCTGAATCTGATTCCGACATTGGTGGATGCAAAGCTGGGAATAAGACCTGCAGCAGTTTGATTTCGGAACAAGAAAAAGAAAACTCACCATTTGCTCCGTGTGATATCTGCTGCGTTGAATCGAGATTTTGCCGTGAATGTTGCTGCATTCTCTGCTACAAATCAGTTGATTCAGCTTATGGCGGCTATAGCTATATCATGTGCAAAAAAGAACTAGGCGATAATATTTGCGGCCATGTTTGTCATCTGGAGTGCGCTCTTCGATCTTATTCGGCTGGTACTGTTGGAGGAGAGATTGGATTGGACGCTGAGTATTTCTGTTGGCGCTGTGATGGGAGGACTGAACTGATTGCTCATGCAAATAAGCTTCTACAAACTTGTGAAGCTATCCATGCTGATGATGATGCTACAAAAGAAAAAATTCTAGGGCTTGGCATTTGTCTCTTGCGCGGTTCAGAGAAAACCGCTGCAAAGGAGCTTATGAGCCTTATTACATTGGCCATGTCAAAGCTTAAACATGATGGGACTAATACTGAAGATATCCTGAATGTTGATGCCAAAATTACTGCTAATTCTTCAGGTTCTTCCGGTAACGGCAATGCTGCGATGGATACTTCAGATGACGAAGGTCCTGTAAAGAATTTAAATGTTCAAAAAGGAACAAAATCTTTTAATTATCAATCTGAATTATTAAAACTTGATGCTGAGTTTGATAAGGCTATGGAGGATCTGGAAAAATCTCAAAAGTATGAATATAAGCTGGCAGAGGAAAGCCTTCATACACAAAAGGATTATTTACTAAATATTTCTCAGCAACTCGATGAACAGAAGTCTGAGTTAGCAGCAGGTCCATCTCATTCAAGTACCTTGCTTCAAATTGTTGAGGAAAGAAATGAACAATTAAGGCAGGAACTGAAGAAATTTGAAGAAATGAAGAAGGTGGCTAATGGTTTTGGCAGCACATCCAAAGAAATTTTAGAAAAGCATTTTGGCTTGTAA 1377 0.4263 MEFDNDGASDLPPVAPEGSGDGLPYAPENFPNPGDIWRWKAGQRISSNGNFRDRYLYLPRRIAASHRGGFKSKLAVERYVKEFFPDASLVDFFASFSWSIPSGLPGNMNPVAAADGLLRQLELKQQPESDSDIGGCKAGNKTCSSLISEQEKENSPFAPCDICCVESRFCRECCCILCYKSVDSAYGGYSYIMCKKELGDNICGHVCHLECALRSYSAGTVGGEIGLDAEYFCWRCDGRTELIAHANKLLQTCEAIHADDDATKEKILGLGICLLRGSEKTAAKELMSLITLAMSKLKHDGTNTEDILNVDAKITANSSGSSGNGNAAMDTSDDEGPVKNLNVQKGTKSFNYQSELLKLDAEFDKAMEDLEKSQKYEYKLAEESLHTQKDYLLNISQQLDEQKSELAAGPSHSSTLLQIVEERNEQLRQELKKFEEMKKVANGFGSTSKEILEKHFGL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi827g00013 458 MobiDBLite consensus disorder prediction 318 338 - -
Vivi827g00013 458 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 10 458 - -
Vivi827g00013 458 MobiDBLite consensus disorder prediction 1 27 - -
Vivi827g00013 458 Pfam PHD - plant homeodomain finger protein 139 265 IPR032881 -
Vivi827g00013 458 Coils Coil 417 437 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi827g00013 166 298 PHD Gene Family AT3G24440 27.007 8.95e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi827g00013 - - psat:127092568 761.525