Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi827g00011 ATGCCTCGATTAAATCTTCCCAACAGTTACTATCAAACTCAATATATGTGGTGGAGACCAAATCTAAGATCACCCGACATGGAGTTTGATAATGACGGGGCTTCCGATCTTCCACCGGTGGCACCCGAAGGATCCGGCGACGGTTTACCTTATGCACCAGAAAATTTTCCGAATCCCGGCGACATTTGGCGGTGGAAAGCTGGCCAGAGGATTTCGTCCAACGGTAACTTTAGGGACCGGTATCTGTATCTTCCTCGGCGTATTGCTGCCTCTCACCGCGGTGGATTCAAAAGCAAGCTTGCTGTTGAACGCTACGTCAAAGAATTCTTCCCTGACGCTAGTCTTGTTGATTTCTTTGCTTCTTTCAGCTGGAGCATTCCCTCTGGTCTTCCTGGCAATATGAATCCTGTTGCTGGATCTGATGGACTTCTTCGTCAGTTAGAATTAAAACAGCAGCCTGAATCTGATTCCGACATCGGTGGATGCAAAGCTGGGAATAAGACCTGCAGCAGTTTGATTTTGGAACAAGAAAAAGAAAACTCACCATTTGCTCCGTGTGATATCTGCTGTGTTGAATCGAAATTTTGCCGTGAATGTTGCTGCATTCTTTGCTACAAATCAGTTGATTCAGCTTATGGCGGCTATAGCTATATCATGTGCAAAAAAGAGCTAGGCGATAATATTTGCGGCCATGTTTGTCATCTGGAATGCGCTCTTCGATCTTATTCGGCTGGTACTGTTGGAGGAGAGATTGGATTGGACGCTGAGTATTTCTGTTGGCGCTGTGATGGGAGGACTGAACTGATTGCTCATGCAAATAAGCTTCTACAAACTTGTGAAGCTATCCATGCTGATGATGATGCTACAAAAGAAAAAATTCTAGGGCTTGGCATTTGTCTCTTGCGCGGTTCAGAGAAAACCGCTGCAAAGGAGCTTATGAGCCTTATTACATTGGCCATGTCAAAGCTTAAACATGATGGGACTAATACTGAAGATATCCTGAATGTTGATGCCAAAATTACTGCTAATTCTTCAGGTTCTACCGGTAACGGCAATGCTGCGATCGATACTTCAGACGACGAAGATCCTTTAAAGAATTTAAATGTTCAAAAAGGAACAAAATCTTTTAATTATCAATCGGAATTATTAAAACTTGATGCTGAGTTTGATAAGGCTATGGAGGATCTGGAAAAATCTCAAAAGTGTGAATATAAGCTAGCAGAGGAAAGCCTTCATACACAAAAGGATTATTTACTAAATATTTCTCAGCAACTCGATGAACAGAAGTCTGAGTTAGCAGCAGGTCCATCTCATTCAACTACCTTGCTTCAAATTGTTGAGGAAAGAAATAAACAATTAAGGCAGGAACTGAAGAAATTTGAAGAAATGAAGAAGGTGGCTAATGGTTTTGGCAGCACATCCAAAGAAATTTTAGAAAAGCATTTTGGCTTGTAA 1455 0.4199 MPRLNLPNSYYQTQYMWWRPNLRSPDMEFDNDGASDLPPVAPEGSGDGLPYAPENFPNPGDIWRWKAGQRISSNGNFRDRYLYLPRRIAASHRGGFKSKLAVERYVKEFFPDASLVDFFASFSWSIPSGLPGNMNPVAGSDGLLRQLELKQQPESDSDIGGCKAGNKTCSSLILEQEKENSPFAPCDICCVESKFCRECCCILCYKSVDSAYGGYSYIMCKKELGDNICGHVCHLECALRSYSAGTVGGEIGLDAEYFCWRCDGRTELIAHANKLLQTCEAIHADDDATKEKILGLGICLLRGSEKTAAKELMSLITLAMSKLKHDGTNTEDILNVDAKITANSSGSTGNGNAAIDTSDDEDPLKNLNVQKGTKSFNYQSELLKLDAEFDKAMEDLEKSQKCEYKLAEESLHTQKDYLLNISQQLDEQKSELAAGPSHSTTLLQIVEERNKQLRQELKKFEEMKKVANGFGSTSKEILEKHFGL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi827g00011 484 Coils Coil 443 463 - -
Vivi827g00011 484 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 34 484 - -
Vivi827g00011 484 Pfam PHD - plant homeodomain finger protein 165 291 IPR032881 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi827g00011 192 324 PHD Gene Family AT3G24440 27.007 9.76e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi827g00011 - - psat:127092568 790.801