Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi81g00020 ATGAGTTACGGCGGTGAATCATTGGACTTCCGAAACCTGAAGGTGATATCCGCTGTCGGACGCGGTGCAAAAGGCGTTGTGTTTCTTGGGAGAATTTACGGATCGGCGAAAGAGGAATGGCTGGCTTTGAAAGTGATATCCAAAGAGCTTCTTCAGAAGAAGAATAATAACAGAATCGATAAATGCAAAAGAGTAACGTTTGAACAACAGGTACTACGTCGTTTTGATCATCCCCTTTTGCCTCGGTTGAAAGGAGTTTTTGAAACGGAGAAGCTCATTGGTTTCGCTATGGATTATTGTCATGGTGGGAATTTGCATTATCTTAAGAAGAAACAACCGGAGAAAAAATTCTCAGAAGAAGCCATTAGGTTTTATGCTGTGGAATTGGTGTTAGCATTGGAATATCTACACAATCTAGGAGTAGTTTATAGAGATTTGAAGCTTGAAAACATTATGATCCAACAAAGTGGTCACATAATGCTAGTAGATTTCGACTTATCAAAGAAACTAAATCCAAAATCACCCAACTCACTGAGTTGCAACTCGTCACCAGGTTCAAACTCGTCATCCGGTTCCAACTCGCCAGATATGAAAAACAGAAGGATGAAATGGTTGTCACGGTTTTATTGTCACCGTCCTTCTGGAAAACCGGAACTCAACTCAGCGAGTCAGATCGATCCTAACTCGACGTGTAAAAGGAGCGAGTCAGACTCAGTTGAGAAATCCAACTCGTTCGTGGGGACCGAGGATTACGTGGCACCTGAAGTTATCAAGGGGCGTGGACATAATTTTGCTGTCGATTGGTGGTCGTTCGGTGTCGTTTTGTATGAAATGCTTTATGGAACGACGCCGTTTAATGGTCCTAATAGAAAGGAAACGTTTCACAAGATTTTAACTAGGGAGCCTGAACTAGAGGGTGAAACGACGCCGTTGAAGGATTTGATTGTGAAGTTGCTTGAGAAAGATGCTGACCTTAGGATTCAGGTTGATGAGATTAAGGGTCACGATTTCTTTAAAAGTGTCAAGTGGAACATAGTGTTGGGAATTGCTCGTCCACCGTATATTCCTCCTAATGAAATTGTGGACAAAGCTGGATTTTCGAGGAAGGAAGTTGAATCGTTTGTTCATGGAATATTTTTTCCTAAAAATAAAAATAATAATGAAGAGATTAAAAAGGAGAAAAATAATGAAGAGATTAAAAAGGATGGAAAGGAGAAGGGTGAGAATGAAGATATCAATGATGGTGGTAATAAGAATGTGTGGGTTGAGAAATTGAGTCAGAATCATACTAGAGATGATAATTTTTTGATTTTTTAA 1317 0.4002 MSYGGESLDFRNLKVISAVGRGAKGVVFLGRIYGSAKEEWLALKVISKELLQKKNNNRIDKCKRVTFEQQVLRRFDHPLLPRLKGVFETEKLIGFAMDYCHGGNLHYLKKKQPEKKFSEEAIRFYAVELVLALEYLHNLGVVYRDLKLENIMIQQSGHIMLVDFDLSKKLNPKSPNSLSCNSSPGSNSSSGSNSPDMKNRRMKWLSRFYCHRPSGKPELNSASQIDPNSTCKRSESDSVEKSNSFVGTEDYVAPEVIKGRGHNFAVDWWSFGVVLYEMLYGTTPFNGPNRKETFHKILTREPELEGETTPLKDLIVKLLEKDADLRIQVDEIKGHDFFKSVKWNIVLGIARPPYIPPNEIVDKAGFSRKEVESFVHGIFFPKNKNNNEEIKKEKNNEEIKKDGKEKGENEDINDGGNKNVWVEKLSQNHTRDDNFLIF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi81g00020 438 Pfam Protein kinase domain 240 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi81g00020 438 Pfam Protein kinase domain 15 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi81g00020 438 MobiDBLite consensus disorder prediction 389 413 - -
Vivi81g00020 438 FunFam Serine/threonine-protein kinase OXI1 104 172 - -
Vivi81g00020 438 MobiDBLite consensus disorder prediction 389 433 - -
Vivi81g00020 438 MobiDBLite consensus disorder prediction 175 197 - -
Vivi81g00020 438 Gene3D Transferase(Phosphotransferase) domain 1 104 175 - -
Vivi81g00020 438 Gene3D Transferase(Phosphotransferase) domain 1 230 357 - -
Vivi81g00020 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Vivi81g00020 438 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Vivi81g00020 438 ProSiteProfiles Protein kinase domain profile. 13 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi81g00020 438 MobiDBLite consensus disorder prediction 215 239 - -
Vivi81g00020 438 FunFam Serine/threonine-protein kinase OXI1 240 357 - -
Vivi81g00020 438 SUPERFAMILY Protein kinase-like (PK-like) 12 364 IPR011009 -
Vivi81g00020 438 PANTHER FLIPPASE KINASE 1-RELATED 8 364 - -
Vivi81g00020 438 SMART serkin_6 13 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi81g00020 438 MobiDBLite consensus disorder prediction 217 232 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi81g00020 7 438 AGC Kinase Gene Family AT3G25250 51.591 5.82e-134 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi81g00020 Pkinase 4.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi81g00020 K20714 - gmx:100813693 525.398