Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi81g00016 ATGAAGTTCAACGTTGCTAACCCCACCACTGGATGCCAGAAGAAGCTTGAGATCGATGATGATCAGAAACTGCGAGCATTTTGGGACAAGAGGATTTCACAAGAGGTCAATGGAGATGCCCTTGGTGAGGAATTTAAAGGTTATGTCTTTAAAATTACTGGAGGTTGTGACAAACAAGGATTTCCAATGAAGCAGGGAGTGCTGACCCCTGGCCGTGTTCGTCTTTTGCTTCACCGGGGGACTCCTTGCTTCCGAGGACACGGAAGACGTACTGGAGAGCGCAGAAGAAAATCTGTTCGTGGGTGCATTGTTAGCCCCGACCTCTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGAGAATGACTTACCTGGCCTAACCGATGTTGAGAAGCCAAGGATGAGAGGTCCTAAGAGAGCATCCAAAATCCGTAAGCTGTTCAACCTGTCAAAGGAGGATGATGTGAGGAAGTATGTCAACACCTACCGTAGAACATTTACAACAAAAGCTGGGAAAAAGCAGAGCAAAGCTCCCAAGATTCAACGTCTGGTTACTCCTCTCACTCTCCAAAGAAAGCGAGCAAGAATTGCCGATAAGAAGAAGAGAATTGCCAAGGCAAAATCAGAGGCGGCTGATTACCAGAAGCTTCTTGCTTCAAGGTTGAAGGAGCAGAGGGATCGTCGCAGTGAGAGTTTAGCCAAGAAGAGATCTAGGATTTCAAGTGCTACCAAGGCACCTGTCACCGCATAG 750 0.472 MKFNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKQSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRDRRSESLAKKRSRISSATKAPVTA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi81g00016 249 Coils Coil 189 216 - -
Vivi81g00016 249 MobiDBLite consensus disorder prediction 218 249 - -
Vivi81g00016 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 239 IPR001377 GO:0003735|GO:0005840|GO:0006412
Vivi81g00016 249 MobiDBLite consensus disorder prediction 218 237 - -
Vivi81g00016 249 Gene3D - 133 234 - -
Vivi81g00016 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Vivi81g00016 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
Vivi81g00016 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Vivi81g00016 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi81g00016 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 74.297 2.25e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi81g00016 K02991 - gmx:547746 434.106