Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi81g00003 ATGGAGTCAATATTCAAGAGTTGTGAAAATAAGACCGAGAAAAGTTTTGAGCAACCAATTAGGGTTAGTTCAAGACTTCAAAATCAACATAAACTTTCTTATAACCTCTACCACAAAAGAGGTATCAAATTTGAAGACAATTTTATTCAAAAAAGACCAAAGCTCAACCATTTGAAGAAACAACAAACATTGGATGATAAAATTCATGAAAGTGACCCTTGGTTAGAATCTATAGATTCAAGTTCTTCAAAAAGTACAGGTTTATTTGTGTTTGACGAACTTGACATGAGGGGCATTTTGTCTCTGAGACAAACATTTAGACTTTTCAATCTTCATAATCTTGCTAAGGAAGAGACTAATAACAAAAAGGCCAATGCCTGGCTTGTAAGGGATAGCAAGAAAGAATTTATTCAATTAATTTTTATTGTATTGCAGATTGTTGAAAATGGCATTGATAATGAACTTGTTATGGGACTCACAACATCAAAATATCTGATCAATAAGCTTCAGACACTTGCTAAAGTGGGAATAGATAAGGTCCATTTTATGAAAGGTCAAGTCGCTAGAGCTATTTCTTCTTCGCCAAGTTTGGTATGCAACGACATTAGTGATGGACAAGAAGCTATTAGCATAATTGCAACCAATGAATTTGATGATCCTCCCACTGCTCCTATTGGTTTTACCTATATTATGTCAAATAAAGTTTCAAAACATGTCAAGATTCCATCAAGGACTCATGGATGTCATTGCCAAGGAAGTTGTAGAAATATTAAAATATGTTCATGCACTAATTTTTTTAATGGCTTTAACTTTCCTTACACAAACGATAATAGATTAATAGAGCCTCGAGACATCGTAGTGGAATGTGGGCCGCAGTGTGGATGCGGGCCTAACTGTGGAAATAAAATTTCCCAAAAGGGTTTGAATTATAGACTTGAGGTTTATCGTACAGTCAAAAAAGGATGGGCTGTTAGAACATGGGACTTTATACCTTCTGGTGCACCAGTAATAGAATATATTGGTGTACTAAGTAGAGACGATAAATTAGATAATTCAATTATCAATGACTACATATTTGATATTGATTGCTTGCACACAATCAATGGATTGGATGGAAGAAATAAAAGGATGGGCGATGTAATACTGCCTAAAAGCAAATCATATCAAAATAAAGTCAGCGAAATAGAAAAAGATCCCGAATTTTGTATTGATGCAGGTTCTTTCGGAAATGTTTCAAGGTTTATCAACCACAGTTGTGAGCCAAACCTTTTTGTACAATGTGTTCTCAACAATCACCTTGATGTTAGACTAGCTCGTCTGATGTTGTTTGCGGCACATGACATACCTCCCTACCAGGAACTGACTTATGACTATGGATATAGACTTGATAGTGTGGTTGATTCAAATGGAAAAATCAAACAGCTTCAATGTCATTGTGGTGCAAAGAAATGTCGTAAGCGTTTGTACTAG 1470 0.351 MESIFKSCENKTEKSFEQPIRVSSRLQNQHKLSYNLYHKRGIKFEDNFIQKRPKLNHLKKQQTLDDKIHESDPWLESIDSSSSKSTGLFVFDELDMRGILSLRQTFRLFNLHNLAKEETNNKKANAWLVRDSKKEFIQLIFIVLQIVENGIDNELVMGLTTSKYLINKLQTLAKVGIDKVHFMKGQVARAISSSPSLVCNDISDGQEAISIIATNEFDDPPTAPIGFTYIMSNKVSKHVKIPSRTHGCHCQGSCRNIKICSCTNFFNGFNFPYTNDNRLIEPRDIVVECGPQCGCGPNCGNKISQKGLNYRLEVYRTVKKGWAVRTWDFIPSGAPVIEYIGVLSRDDKLDNSIINDYIFDIDCLHTINGLDGRNKRMGDVILPKSKSYQNKVSEIEKDPEFCIDAGSFGNVSRFINHSCEPNLFVQCVLNNHLDVRLARLMLFAAHDIPPYQELTYDYGYRLDSVVDSNGKIKQLQCHCGAKKCRKRLY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi81g00003 489 ProSiteProfiles Post-SET domain profile. 473 489 IPR003616 -
Vivi81g00003 489 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 179 483 - -
Vivi81g00003 489 SMART preset_2 199 294 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi81g00003 489 Pfam SET domain 321 459 IPR001214 GO:0005515
Vivi81g00003 489 ProSiteProfiles SET domain profile. 310 459 IPR001214 GO:0005515
Vivi81g00003 489 ProSiteProfiles Pre-SET domain profile. 246 307 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi81g00003 489 SUPERFAMILY SET domain 194 465 IPR046341 -
Vivi81g00003 489 SMART PostSET_3 473 489 IPR003616 -
Vivi81g00003 489 Pfam Pre-SET motif 202 302 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Vivi81g00003 489 SMART set_7 310 465 IPR001214 GO:0005515
Vivi81g00003 489 Gene3D SET domain 192 489 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi81g00003 156 489 EF-hand Containing Proteins AT5G13960 55.193 1.16e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi81g00003 SET 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi81g00003 K11420 - vvo:131613791 793.497