Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi817g00001 ATGAATTCTAGAGAATTGAACATGATGAAATTTCCAATGAGTCTAATTAGCACTTGGTCTGATGATCACGATGATAATGATCAAGATCACGAACATGATGATGATCATCACCGTCCTCGTGTTATTGTCGACGAAGTCGACTTTTTCTCGGATAGAAAGGAGAAATCATCGTCGCCAGATGATCATGTTTCCGTCAAGAATAATCAGATTTATGATCCTCATTGCAATCTAGATGCTGACCATGTCAACACCGGTTTGCAACTGCTTATTACTAATATTGGAAGTGAGTTGGAGGATGAAACTGCAATAAATGGTGGAGATAAACATGTCAAGAATCTTCAGTTTCAGTTGCAAGAAGAGCTTAGACTTAAGAATGTAGAGAATCAACGGTTGAAGGAGAAGCTAAGCGATTTGCAAATGCGTTATGTGTCGTTAATGCAACAGAATCAACGAAATGAAGCATCTGAAAATGAGACTGTGAATGGAAAAGCTGAGGGGGGAGATTCTGTGTCTAGGAAGTTTGTGAGTGGTTCAACATCAGAAGTAGTTGATCCAAAAGTATTACATTGTCCTAATTTGGATGAAAGAAAGCGATCAAGGTCGCCTCGGAACAACAATAAAACTGATCAGAAAGAGCCTGATCCAGAATCAACAGATCAACTGGTACAAGTTTGGGAGCCAAATAAACTTCCAAGATTAAACCCTTCCAATGCCACGGATCAAGCTGCTGCTGAAGCTACTATGAGAAAAGCACGCGTCTCCGTCCGTGCCCGATCAGAAGCCCACATGATCAATGATGGGTGCCAATGGCGAAAGTATGGACAGAAAATGGCAAAGGGAAACCCTTGTCCTCGAGCATATTATCGATGCACAATGGCAGTCGGTTGCCCCGTTCGCAAGCAAGTTCAGCGTTGTGCTGAGGACAAAACAATACTGATAACAACATATGAAGGGACACATAGTCATCCACTGCCACCTGCTGCTATGCCGATGGCGTCAACCACCGCAGCCGCTGCCACCGTGTTACTATCTGGATCAATGTCAAGTGCTGATGGGGTGGTGAACCCAAATTTACTATCCAGAATTCTTCCAAACTGCTCATCCAGCATGGCCACACTCTCAGCAACAGCACCATTTCCTACTGTCACACTAGACCTCACACATGACAACACAGATAACAATAATAACCAAAATTCTCATTCCCAATTTCACCTTGGACAGCCTCAAAACTTTGGATCAGGACAATTACCACAAGTCATTGCACAAGCACTTTATAACCAATCCAAATTCTCTGGCCTTCAACTGTCTCAAGATGTTGGAGGCTCTTCCCAATTGCACTCATCTCAACAAGCTTCATCACTCAGTGCTGCCATCACCGCCGATCCAAACTTCACCGCAGCTATCGCCGCCGCTATCTCCACCATAATTGGCGCTGGTTCTCCCAACAACAACAGCAACAACAACAATCCAAATATCCTCAACAGTGCTGCCTACAATCAGTAG 1503 0.4378 MNSRELNMMKFPMSLISTWSDDHDDNDQDHEHDDDHHRPRVIVDEVDFFSDRKEKSSSPDDHVSVKNNQIYDPHCNLDADHVNTGLQLLITNIGSELEDETAINGGDKHVKNLQFQLQEELRLKNVENQRLKEKLSDLQMRYVSLMQQNQRNEASENETVNGKAEGGDSVSRKFVSGSTSEVVDPKVLHCPNLDERKRSRSPRNNNKTDQKEPDPESTDQLVQVWEPNKLPRLNPSNATDQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSSADGVVNPNLLSRILPNCSSSMATLSATAPFPTVTLDLTHDNTDNNNNQNSHSQFHLGQPQNFGSGQLPQVIAQALYNQSKFSGLQLSQDVGGSSQLHSSQQASSLSAAITADPNFTAAIAAAISTIIGAGSPNNNSNNNNPNILNSAAYNQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi817g00001 500 SUPERFAMILY WRKY DNA-binding domain 257 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi817g00001 500 MobiDBLite consensus disorder prediction 479 500 - -
Vivi817g00001 500 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi817g00001 500 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 112 488 IPR044810 GO:0003700
Vivi817g00001 500 MobiDBLite consensus disorder prediction 188 216 - -
Vivi817g00001 500 MobiDBLite consensus disorder prediction 19 41 - -
Vivi817g00001 500 Pfam WRKY DNA -binding domain 265 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi817g00001 500 FunFam probable WRKY transcription factor 31 249 326 - -
Vivi817g00001 500 MobiDBLite consensus disorder prediction 148 220 - -
Vivi817g00001 500 Coils Coil 114 148 - -
Vivi817g00001 500 MobiDBLite consensus disorder prediction 386 408 - -
Vivi817g00001 500 Gene3D WRKY domain 249 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi817g00001 500 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi817g00001 500 MobiDBLite consensus disorder prediction 148 164 - -
Vivi817g00001 500 MobiDBLite consensus disorder prediction 20 41 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi817g00001 9 491 WRKY Transcription Factor Family AT1G62300 47.719 1.04e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi817g00001 WRKY 8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi817g00001 - - mtr:11439068 552.747