Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi816g00012 ATGTTTCTTCTTGCTGCAGGTTTTGAAGAGAGATTTCAGAAGGAATCTTTGCTAAGTTCATCTGCTGTTCGACCGACCTTGGTTAAGATATTGCTCCAGTTATTGAGGGTGCTGTTAACCACATTGCCTCGAGAAGATTTGAGTTTGGAGCTATACTCATGTTGTGCTGAAGATGACTTTGCTTATCTGAAGACCAAAGATCATTGTCCTGTGGAGACACATACCCTTCCTGATGGACAGGTGATAACAATTGGAAGAGAAATATATACAGTTGGTGAAGCTTTATTCCAGCCAAGTCTATTGGGTTTAGAGGCTCATGGCATTGTAGAGCAGCTTGTCTGTACTATTTCAACAGTGACATATGATAATCATCGGCAACTTCTGGAAAATACTGTGGTTTGTGGTGGCACTTCTTCTATGACTGGTTAA 429 0.4103 MFLLAAGFEERFQKESLLSSSAVRPTLVKILLQLLRVLLTTLPREDLSLELYSCCAEDDFAYLKTKDHCPVETHTLPDGQVITIGREIYTVGEALFQPSLLGLEAHGIVEQLVCTISTVTYDNHRQLLENTVVCGGTSSMTG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi816g00012 142 Pfam Actin 62 142 IPR004000 -
Vivi816g00012 142 Gene3D Actin; Chain A, domain 4 58 105 - -
Vivi816g00012 142 Gene3D - 106 142 - -
Vivi816g00012 142 PANTHER ACTIN 45 142 IPR004000 -
Vivi816g00012 142 SUPERFAMILY Actin-like ATPase domain 38 142 IPR043129 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi816g00012 27 142 Cytoskeleton Gene Families AT3G18780 36.667 6.40e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi816g00012 K16615 - vvo:131636752 267.314