Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi815g00010 ATGAACATCAACACTTCATATGTAATCTCCAAGAAAATAGCATTCAAACTCATCTATGTTTTTCTTCTATACATTACCAAATATCATTCCACTTCATCTGCATCAACCTTGCAAGGAAATGAAACTGATTTACATGCTTTACACAACTTCAAAAGTAGAATAACTCAAGATCCATTTCACACACTGAGTTCATGGAATGATTCCATCCACCACTGCAACTGGTTAGGAATCACTTGCAACATCTCCAATGGAAGAGTCATACATATGATCCTACCAGACATGACACTAGCAGGAACTCTTTCACCATCAATAGGAAATCTCACATACCTCACAAAACTCAACATTAGAAACAGTAGCTTCCATGGAAAGTTTCCTCAACAAGTTGGAAATTTGTTGCATCTTCAACATCTAAATATTAGTTATAACTCTTTTGGTGGCACCATTCCAAGTAATCTAAGTCACTGCATGGAGTTAAGTATATTGAGTTCTGGTCATAACAACTTCACAGGAACAATTCCAACATGGATAGGAAATTTTTCTTCTTTATCTTTACTCAACCTTGCTGTGAACAATTTGCATGGAACCATACCAAATGAGCTAGGAAAGTTATCAAGCCTAACACTTTTCGCGATAAATGGAAATTACTTGTATGGTAAGATTCCTACTTCAGTTTTCAATATTTCTTCCTTGTATTTTCTCACCTTCTCTGAGAATAATCTGCATGGTTACTTACCTTCTGAGGTTGGTTTTACTCTTCCTAATCTTGAAATATTTGCCGGTGGACTCAATCGTTTCACCGGAACAATACCTGAATCACTTTCAAATGCTTCAAGATTGCAAATTCTTGATTTTGCTGATAATAGTCTCATTGGAACACTTCCGAAGAGCATAGGAAGGTTGAATAAGTTGACAAGACTCAATTTTGAAACCAATAGGCTTGGAAAAGGGAAAGATGGTGACCTAGATTTTATTACTTCATTGATTAATTGTACTGTTCTTGAAGTTTTAGGTCTTGCTAAGAATAATTTTGGAGGAGAATTACCGAAGTCGATAGCTAATCTTTCAACACAGTTGAATGGACTAGCATTAGGTACAAATTCTATCTATGGAAGTGTCCCTATTGGAATAAGTAACCTTGTTAACTTGACCACTTTGGGATTGGAAAATAATTTCCTAAGTGGTTTTGTTCCTTACACAATAGGCATGCTTCAAAATTTGGTAGATTTAGAATTGTTTAACAACAGTTTTTCGGGTTTGATCCCTTCCACCATAGGAAGCTTGAATAGATTAATAGTGCTACTAATAGGAGATAACAACTTTGAGGGAAGTATACCGGAAAGTATTGGAAATTGTCAAAACTTGTTGCGGCTAAATTTGAGCCATAACAAGCTCAATGGTACTATACCAAGACAGGCATTTTCCTTGTCTTCTCTTTCGATATACTTAGACCTGTCTCATAATGCTCTCATAGGGTCCTTGCCTTTTGAAGTAGGTAAGCTAGTTAATCTAGAAAAGTTGGATCTATCGAACAACAAATTGTCGGGCGCGATTCCGTCTTCGCTTGGAAGCTGTGCTAGTTTGGAAGGGCTGCATATGGAGGATAACTTTTTTGAAGGAAGCATTCCTTCAACTATACAGAATTTGAGAGGTATACAAGATATTGATCTGTCATGCAATAACTTATCTGGGAAGATTCCTGAGTTTCTTGGTGAGATCAAAGGGCTAATGCGTCTCAATCTTTCTTACAATGATTTTGAGGGAGAGTTACCGATGAACGAAATCTTCCGAAATGCAACATCCTTTTCAATTGATGGAAATATCAAGCTTTGTGGCGGTATCTCAGAATTAAACCTACCTTCATGCACTATCAAAAAATTTCATAGCCCGAAAGTGAGTATCCCTATAGTTAGTGCACTAGTATTTGTACTCTTTCTATCTTGTTTTGTAGCAATCTGGATGAGAAAAAGATCAGGAAAGAAAACTTCAAGAGAAACAGTTACTACAAAAGAATTGGAACTGAATATTTCCTACTCGGAAATTTTAAAGTGCACCGGTGGATTCTCCCCGAATAACTTGATTGGCACAGGAAGTTTTGGTTCTGTATACAAAGCAACGCTTTCAAGCGATGAAACAATTATTGCGATTAAAGTGTTGAATCTTGAACAGATAGGAGCTTCAAAAAGCTTCATTGACGAATGCAATGTTCTGAAAATTGTAAGGCACCGCAACCTACTCAAGATCATAACTGCTATATCAGGTATTGATCATAAAGGTAATGACTTCAAAGCACTTGTGTATGAGTTCATGTCGAATGGAAGTCTAGAAGATTGGTTGCATCCTAAGAATCAGACAAAAACACTGTCTTTTGTCAAAAGACTCAACATAGCTATTGATGTTGCTTGTGCACTTGAATATCTTCACCATTCTTGTGGAACTCCTATTGTTCATTGTGACATAAAGCCAAGCAATGTACTTCTTGACAAAAATATGGTAGCACATGTTGGTGACTTTGGTTTAGCTACATTTCTGTTTGAAGAATCATGTGATTCTCCTAAACATTCAACCATGACAGCTAGCTTAAAGGGCTCTATTGGATACATCGCTCCAGAGTATGGAATGGGTGGACACGCATCTGCGGTTGGAGATGTTTACAGTTATGGGATACTATTGCTAGAGATTTTCACAGGAAAAAGGCCAACTGATGAAATGTTTGAAGGTGGCATGGGAATTCAACAATTTACAGCCTTGGCTTTACCGAGTCATGTTAAAGATATAATCGATCCTACATTGCTACATGATGAAGAACACGGTGGATATGATGAAGATTACAGTGGAGAGATAGCATTAAGTTATGAGAATAAACCTGGAGACATGTCTAGTATGAAGAATTGTTTGGTGTCTGTCTTGCAGATTGGAGTGTCGTGCTCTTCATCTTCACCAATTGAAAGAATACCTATGAATGTGGTTGTCAACAAACTGCAAACAATCAAGAACTTATATTTTAATGAATTTACAGTAATGGACACGCAACAGTGTTAA 3039 0.3689 MNINTSYVISKKIAFKLIYVFLLYITKYHSTSSASTLQGNETDLHALHNFKSRITQDPFHTLSSWNDSIHHCNWLGITCNISNGRVIHMILPDMTLAGTLSPSIGNLTYLTKLNIRNSSFHGKFPQQVGNLLHLQHLNISYNSFGGTIPSNLSHCMELSILSSGHNNFTGTIPTWIGNFSSLSLLNLAVNNLHGTIPNELGKLSSLTLFAINGNYLYGKIPTSVFNISSLYFLTFSENNLHGYLPSEVGFTLPNLEIFAGGLNRFTGTIPESLSNASRLQILDFADNSLIGTLPKSIGRLNKLTRLNFETNRLGKGKDGDLDFITSLINCTVLEVLGLAKNNFGGELPKSIANLSTQLNGLALGTNSIYGSVPIGISNLVNLTTLGLENNFLSGFVPYTIGMLQNLVDLELFNNSFSGLIPSTIGSLNRLIVLLIGDNNFEGSIPESIGNCQNLLRLNLSHNKLNGTIPRQAFSLSSLSIYLDLSHNALIGSLPFEVGKLVNLEKLDLSNNKLSGAIPSSLGSCASLEGLHMEDNFFEGSIPSTIQNLRGIQDIDLSCNNLSGKIPEFLGEIKGLMRLNLSYNDFEGELPMNEIFRNATSFSIDGNIKLCGGISELNLPSCTIKKFHSPKVSIPIVSALVFVLFLSCFVAIWMRKRSGKKTSRETVTTKELELNISYSEILKCTGGFSPNNLIGTGSFGSVYKATLSSDETIIAIKVLNLEQIGASKSFIDECNVLKIVRHRNLLKIITAISGIDHKGNDFKALVYEFMSNGSLEDWLHPKNQTKTLSFVKRLNIAIDVACALEYLHHSCGTPIVHCDIKPSNVLLDKNMVAHVGDFGLATFLFEESCDSPKHSTMTASLKGSIGYIAPEYGMGGHASAVGDVYSYGILLLEIFTGKRPTDEMFEGGMGIQQFTALALPSHVKDIIDPTLLHDEEHGGYDEDYSGEIALSYENKPGDMSSMKNCLVSVLQIGVSCSSSSPIERIPMNVVVNKLQTIKNLYFNEFTVMDTQQC 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi815g00010 1012 Gene3D Ribonuclease Inhibitor 324 623 IPR032675 -
Vivi815g00010 1012 Gene3D Phosphorylase Kinase; domain 1 647 768 - -
Vivi815g00010 1012 SMART LRR_typ_2 379 402 IPR003591 -
Vivi815g00010 1012 SMART LRR_typ_2 131 155 IPR003591 -
Vivi815g00010 1012 SMART LRR_typ_2 403 426 IPR003591 -
Vivi815g00010 1012 SMART LRR_typ_2 500 524 IPR003591 -
Vivi815g00010 1012 SMART LRR_typ_2 451 475 IPR003591 -
Vivi815g00010 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Vivi815g00010 1012 ProSiteProfiles Protein kinase domain profile. 687 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi815g00010 1012 Gene3D Ribonuclease Inhibitor 42 154 IPR032675 -
Vivi815g00010 1012 FunFam Leucine-rich repeat receptor-like protein kinase 40 198 - -
Vivi815g00010 1012 SUPERFAMILY Protein kinase-like (PK-like) 667 993 IPR011009 -
Vivi815g00010 1012 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 769 1005 - -
Vivi815g00010 1012 SMART serkin_6 687 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi815g00010 1012 ProSiteProfiles Leucine-rich repeat profile. 502 524 IPR001611 GO:0005515
Vivi815g00010 1012 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Vivi815g00010 1012 Pfam Protein kinase domain 690 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi815g00010 1012 Gene3D Transferase(Phosphotransferase) domain 1 769 1009 - -
Vivi815g00010 1012 SUPERFAMILY L domain-like 356 611 - -
Vivi815g00010 1012 FunFam Leucine-rich repeat receptor protein kinase EMS1 220 317 - -
Vivi815g00010 1012 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 327 995 - -
Vivi815g00010 1012 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Vivi815g00010 1012 SUPERFAMILY RNI-like 91 417 - -
Vivi815g00010 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 658 768 - -
Vivi815g00010 1012 Gene3D Ribonuclease Inhibitor 155 249 IPR032675 -
Vivi815g00010 1012 Gene3D Ribonuclease Inhibitor 250 323 IPR032675 -
Vivi815g00010 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 319 627 - -
Vivi815g00010 1012 PRINTS Leucine-rich repeat signature 500 513 - -
Vivi815g00010 1012 PRINTS Leucine-rich repeat signature 454 467 - -
Vivi815g00010 1012 Pfam Leucine Rich Repeat 502 524 IPR001611 GO:0005515
Vivi815g00010 1012 Pfam Leucine Rich Repeat 133 155 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi815g00010 40 1001 Receptor kinase-like Gene Family AT3G47570 43.725 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi815g00010 Pkinase 3.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi815g00010 - - gmx:100785230 1398.26