Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi815g00007 ATGAACATCAACGCTTCATGTGTAATCTCCAAGAAAATAGCATTCAAATTCATCTTTTGTTTTCTGCTATGCATTACCAAATATCATTCCACTTCAACTGCATCAACCTTGCAAGGAAATGAAACTGATCTACAAGCTTTACTTGACTTCAAGAGTAGAATAACTCAAGATCCATTTCACACACTGAGTTCATGGAATGATTCCATCCACCACTGCAGCTGGTTAGGAATCACTTGTAACATCTCCAATGGAAGAGTCATATATATGATCCTACCAGACATGGCCCTAACAGGAACTCTTTCACCATCAATAGGAAATCTTACATACCTCACAAAACTCAACCTTAGAAACAGTAGCTTCCATGGAAAGTTTCCTCAACAAGTTGGAAACTTACTATATCTTCAACATCTGAATATCAGTTATAACTCTTTTGGTGGTTCCATTCCAAGTAATCTAAGTCACTGCATAGAGTTAAGTATATTAACTTGTGGCCATAACAATTTCACAGGAGAAATTCCAACATGGATAGGAAATTTTTCTTCTTTATCTTTACTCAACCTTGCTGTGAACAATTTCCATGGAACCATACCAAATGAGGTAGGAAAGTTATCAGGCCTAACACTTTTTGCGATAAATGGAAATTACTTGTACGGTAAGATTCCTACTTCAATTTTCAATATTTCTTCCTTGTACTTTCTCACCTTCTCTGAGAATAATCTGCATGGTAATTTACCTTCTGATATTGGTTTTACTCTTCCTAATCTTGAAACGTTTGCCGGTGGAGTCAATCGTTTCACTGGAACAATACCTGAATCACTTTCAAATGCTACAAGATTGGAAATTCTTGATTTTGCTGAAAATAGTCTCGTTGGAACACTTCCTAAGAACATAGGAAGGTTGAAACTGTTGACAAGACTCAATTTTGATACCAATAGGCTTGGAAATGGGAAAGATGGTGATTTAGATTTCATTACTTCATTGATTAATTGTACTGTTCTTAAAGTTTTAGGCCTTGCTGAAAATAATTTTGGTGGAGAATTACCGGAGTCGATAGGTAATCTTTCAACACAGTTGAATGAGCTAGCATTAGGTACAAATGCTATATATGGAAGTGTCCCTATTGGAATAAGTAACCTTGTTAACTTGACTACTTTGGGATTGGAAAATAATTTCCTAAGTGGTTTTGTTCCTTACACAATAGGCATGCTTCAAAATTTGGTTGATTTAGAATTGTATAACAATAGTTTTTCTGGTGTGATCCCTTCCTCTATAGGAAACTTGAATAGATTAACAGTGCTACTAATAGGGGATAACAATTTCGAGGGAAGTATACCAGAAAGTATTGGAAATTGTCGAAACTTTTTGCGGCTAAATTTGAGCCATAACAAGCTCAATGGTACTATACCAAGACAAGTATTTTCCTTGTCTTCTCTTTCAATATACTTGGATTTGTCTCATAATGCTCTCATAGGGTCCTTGCCTTTTGAAGTAGGTAAGCTAGTTAATCTAGAAGAGTTGGATCTATCGAACAACAAGTTGTCGGGCGTGATTCCGTCTTCGCTTGGAAGCTGTGCTAGTTTGGAAGGGCTACATCTGCAGGATAACTTTTTTGAAGGTAACATTCCTTCAAGTTTACAGAATTTGAGAGGTATACAAGATATTGATCTGTCTAGCAATAACTTATCTGGGAAGGTTCCTGAATTTCTCGGTGAGATCATAGGGCTAATGCGTCTCAATCTTTCTTACAACGATTTCGAGGGAGAATTACCGATGAACAGATTCTTCCAAAATGCAACATTGTTTTCAATTGATGGAAACATCAAGCTTTGTGGTGGTGTCTCAGAATTAAACCTACCTTCATGCACTATTAAAAAATTTCATAGCCCAAAAGTGATTATCCCTATAGTAAGTGCACTAGTGTTTGTACTCTTTCTATCTTGTTTTGTAGCAATCTTCATGAGAAAAAAATCAGGAAAGAAAACTTCAAGAGAAGAAGTTACTACAAAGGAATTTGAACTGAATATTTCCTACTCGGAAATCGTAAAGTGCACGGGTGGATTCTCTAAGGATAACTTGATTGGTACGGGAAGTTTTGGTTCTGTATACAAAGCAACTCTTTTAAGCGACGAAACAATCATTGCAATTAAAGTGTTGAATCTTGAACAGATAGGAGCTTCGAAAAGCTTCATTGATGAATGCAATGTTCTGAAAATTATAAGGCACCGCAACCTACTCAAGATCATAACTGCTATCTCAGGTATTGATCATAAAGGTAATGACTTCAAAGCACTTGTGTATGAATTCATGTCCAATGGAAGTCTAGAAGATTGGTTGCATCCTAAGAATCAAACAAAAACATTGTCTTTTGTCAAAAGACTGAACATAGCAATTGATGTTGCTTGTGCACTTGAATATCTTCACCATTCGTGCGAAACTCCTATTGTTCATTGTGACATAAAACCAAGCAATGTACTTCTTGACAAAAATATGGTAGCCCATGTTGGTGATTTCGGTTTAGCTACATTTCTGTTTGAAGAATCATGTGATTATGATTCTCCTAAACATTCAACTATGACAGCTAGCCTAAAGGGCTCTATCGGATACATCGCTCCAGAGTATGGAATGCGTGGACGAGCTTCTACACTTGGAGATGTTTACAGTTATGGGATACTATTGCTAGAGATTTTCACAGGAAAAAGGCCAACAGATGAGATGTTTGAAGGTGGCATGGGAATTCAACAATTTACGGCCTTGGCTTTACCGAATCATGTTATGGATATAATTGATCCTTCATTGTTGCTACATGATGAAGAACTCGAAGTATATAACGAAGATTACAGTGAAGAGATAGCATTAAGGTATGAGAATGAACCTGGAGACATGTCTAGTATGGAGAAATGTTTGGTTTGTGTGTTGCAGATTGGAGTGTCATGCTCTTCAACTTCACCAAGTGAAAGAATGCATATGGCTGAGGTTGTTAATAAATTGCAAGCAATCAAGAACTCATATTTAAGACTTAATGAGTTAATTTAG 3033 0.3643 MNINASCVISKKIAFKFIFCFLLCITKYHSTSTASTLQGNETDLQALLDFKSRITQDPFHTLSSWNDSIHHCSWLGITCNISNGRVIYMILPDMALTGTLSPSIGNLTYLTKLNLRNSSFHGKFPQQVGNLLYLQHLNISYNSFGGSIPSNLSHCIELSILTCGHNNFTGEIPTWIGNFSSLSLLNLAVNNFHGTIPNEVGKLSGLTLFAINGNYLYGKIPTSIFNISSLYFLTFSENNLHGNLPSDIGFTLPNLETFAGGVNRFTGTIPESLSNATRLEILDFAENSLVGTLPKNIGRLKLLTRLNFDTNRLGNGKDGDLDFITSLINCTVLKVLGLAENNFGGELPESIGNLSTQLNELALGTNAIYGSVPIGISNLVNLTTLGLENNFLSGFVPYTIGMLQNLVDLELYNNSFSGVIPSSIGNLNRLTVLLIGDNNFEGSIPESIGNCRNFLRLNLSHNKLNGTIPRQVFSLSSLSIYLDLSHNALIGSLPFEVGKLVNLEELDLSNNKLSGVIPSSLGSCASLEGLHLQDNFFEGNIPSSLQNLRGIQDIDLSSNNLSGKVPEFLGEIIGLMRLNLSYNDFEGELPMNRFFQNATLFSIDGNIKLCGGVSELNLPSCTIKKFHSPKVIIPIVSALVFVLFLSCFVAIFMRKKSGKKTSREEVTTKEFELNISYSEIVKCTGGFSKDNLIGTGSFGSVYKATLLSDETIIAIKVLNLEQIGASKSFIDECNVLKIIRHRNLLKIITAISGIDHKGNDFKALVYEFMSNGSLEDWLHPKNQTKTLSFVKRLNIAIDVACALEYLHHSCETPIVHCDIKPSNVLLDKNMVAHVGDFGLATFLFEESCDYDSPKHSTMTASLKGSIGYIAPEYGMRGRASTLGDVYSYGILLLEIFTGKRPTDEMFEGGMGIQQFTALALPNHVMDIIDPSLLLHDEELEVYNEDYSEEIALRYENEPGDMSSMEKCLVCVLQIGVSCSSTSPSERMHMAEVVNKLQAIKNSYLRLNELI 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi815g00007 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 769 1008 - -
Vivi815g00007 1010 Pfam Protein kinase domain 688 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi815g00007 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Vivi815g00007 1010 SMART LRR_typ_2 379 402 IPR003591 -
Vivi815g00007 1010 SMART LRR_typ_2 500 524 IPR003591 -
Vivi815g00007 1010 SMART LRR_typ_2 427 451 IPR003591 -
Vivi815g00007 1010 SMART LRR_typ_2 131 155 IPR003591 -
Vivi815g00007 1010 SMART LRR_typ_2 403 426 IPR003591 -
Vivi815g00007 1010 SMART serkin_6 687 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi815g00007 1010 ProSiteProfiles Protein kinase domain profile. 687 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi815g00007 1010 Pfam Leucine rich repeat 482 535 IPR001611 GO:0005515
Vivi815g00007 1010 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Vivi815g00007 1010 FunFam Leucine-rich repeat receptor-like protein kinase 40 198 - -
Vivi815g00007 1010 SUPERFAMILY RNI-like 91 417 - -
Vivi815g00007 1010 ProSiteProfiles Leucine-rich repeat profile. 502 523 IPR001611 GO:0005515
Vivi815g00007 1010 FunFam Leucine-rich repeat receptor protein kinase EMS1 220 318 - -
Vivi815g00007 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 319 627 - -
Vivi815g00007 1010 SUPERFAMILY Protein kinase-like (PK-like) 667 997 IPR011009 -
Vivi815g00007 1010 Pfam Leucine Rich Repeat 134 155 IPR001611 GO:0005515
Vivi815g00007 1010 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Vivi815g00007 1010 CDD STKc_IRAK 693 999 - -
Vivi815g00007 1010 Gene3D Ribonuclease Inhibitor 250 317 IPR032675 -
Vivi815g00007 1010 Gene3D Ribonuclease Inhibitor 156 249 IPR032675 -
Vivi815g00007 1010 Gene3D Ribonuclease Inhibitor 318 628 IPR032675 -
Vivi815g00007 1010 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 326 998 - -
Vivi815g00007 1010 SUPERFAMILY L domain-like 356 611 - -
Vivi815g00007 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 657 768 - -
Vivi815g00007 1010 PRINTS Leucine-rich repeat signature 503 516 - -
Vivi815g00007 1010 PRINTS Leucine-rich repeat signature 548 561 - -
Vivi815g00007 1010 Gene3D Ribonuclease Inhibitor 42 155 IPR032675 -
Vivi815g00007 1010 Gene3D Phosphorylase Kinase; domain 1 648 768 - -
Vivi815g00007 1010 Gene3D Transferase(Phosphotransferase) domain 1 769 1007 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi815g00007 40 1005 Receptor kinase-like Gene Family AT3G47570 43.762 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi815g00007 Pkinase 5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi815g00007 - - gmx:100785230 1415.21