Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi814g00003 ATGAGAAAGAAAAGTATTCCATATTGTTCTTTTCAATATCCATCTTGGTGTCGTGATGATAAACACACACAACCTTTAAGAGGGAATCAATGTGACAGTGACAATTCTGAGAAAGAGAAACATGCATGTCATGTTTGCAGTAAGGGTTTTCCATCCAAAAAGGCTTTGAATGGACACATGAGAATGCACAAAAAGGGTAACAAGGCTATTCCTCCGCCACCAATTTCATCTCCTCAGAATATTGACTTATCACAATATTTGCCACCAAGATCGCATAACTGCAGCAAGAGGAATAGTGATATCAATACTATTGATAACGATTATGGTGACAGGAAAAGGATGAAGCTTCACGGAAATATGGTTAACGAGAAGGTCAAGGAACAAGCTTCGACGCCAATTACTGATCATGTTAGCGGCATTGATGAAAGAGTGAAGATGAAAGTGGAGGATACTGGTGTTGAGATTCAAGATTGTTAA 477 0.3857 MRKKSIPYCSFQYPSWCRDDKHTQPLRGNQCDSDNSEKEKHACHVCSKGFPSKKALNGHMRMHKKGNKAIPPPPISSPQNIDLSQYLPPRSHNCSKRNSDINTIDNDYGDRKRMKLHGNMVNEKVKEQASTPITDHVSGIDERVKMKVEDTGVEIQDC 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi814g00003 158 Gene3D Classic Zinc Finger 16 122 - -
Vivi814g00003 158 SMART c2h2final6 41 63 IPR013087 -
Vivi814g00003 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Vivi814g00003 158 Pfam C2H2-type zinc finger 41 65 - -
Vivi814g00003 158 MobiDBLite consensus disorder prediction 79 99 - -
Vivi814g00003 158 SUPERFAMILY beta-beta-alpha zinc fingers 38 66 IPR036236 -
Vivi814g00003 158 MobiDBLite consensus disorder prediction 63 99 - -
Vivi814g00003 158 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi814g00003 zf-C2H2_6 2.7e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi814g00003 - K26583 vvo:131636698 329.331