Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi811g00042 ATGTCGACGGCTCCGGCACCATCTTCGCCGCCGTCGGGAAACGCCACGGCACCTCCTCCGTCGACCCCAGCCGCACCTCCTCCGGCTACACCTTCTGCACCACCACCTTCCAACCCACCTCCGGCAACTCCTTCATCACCTCCTCCGGCGACACCATCAGCACCTCCGCCGGCGACTCCTTCATCACCACCTCCTCCGAAGACTCCCTCAGCACCTCCTCCAGCAACTCCTTCAACTCCACAACCCACACCTGCAGCACCGTCGACTTCCCCGCCGGCGCCAACCACGCCGTCACCTCCTGAAGGTGGAAACACTCCTCCGAGTCCACCTTCACGAGGCTCCCCGCCTCCTCCGAGAGGCTCTGATCAAAGCCCTACACCGCCTTCCACCAAAACTCCGCCGTCGCCACCTTCATCGTCGTCAAGTTTGAGTACGGGTGTAGTCGTCGGAATCGCCGTGGGCGCGGTGGCGATTCTTGTGGTGTTTAGTATTCTTTGCATTTGCTGTAGGAAGAAAAAGAGAAGACGCGATGAAGAATACTATGGTCAGCAGCATCAGCAACCACCACCTCAGGCACCCAAATTTGAACCTTATGGTGGTCCTCCAAATCAGTGGCAACATAATGCTCACCCTCCTTCAGATCATGTAGCCTCAATGAAGCCACCACCACCTCCTGCTCCGATTCCATCGCGACCGCCGTCTCATGTTGCTCCGCCGCCTCCTCCTCCTCTAATGAGCAGCAGTGGTGGTACCGGCTCAAATTATTCAGGCGGTGAACTACTTCCACCTCCGTCTCCAGGCCTTGCATTTAGCACTGCAAAGAGCACGTTTACGTATGAGGAGTTGGCACGTGCAACGGATGGCTTCTCTGATGCTAACCTCCTTGGACAAGGTGGATTTGGATATGTTCATAGAGGTATTCTCCCTAATGGTAAAGAGGTTGCTGTTAAGCAGCTAAAAGCTGGAAGTGGACAAGGAGAACGCGAATTTCAAGCTGAAGTTGAGATTATTAGCCGTGTTCATCATAAACATCTTGTTTCTCTTGTTGGATACTGCAGCACCGGGTTTCAGAGGCTACTTGTTTATGAGTTTGTTCCCAACAATACATTGGAATTCCATTTACATGGAAATGGACGACCAACAATGGATTGGGCAACAAGACTGCGAATTGCTTTAGGATCTGCAAAAGGACTTGCTTATCTTCATGAAGATTGTCATCCTAAGATCATTCATCGTGATATTAAAGCTGCTAATATCCTTCTCGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGTCTTGCAAAGATTGCTTCTGATCTCAACACTCATGTTTCTACTCGAGTGATGGGAACTTTTGGGTATCTGGCTCCAGAATATGCAGCGAGTGGAAAACTTACTGACAAATCAGATGTTTTCTCTTATGGAGTCATGCTCCTTGAGCTATTAACTGGACGTCGACCGGTTGATAAAAATCAGACTTACATGGATGATAGTTTGGTAGAATGGGCTAGGCCTTTGCTTATGCGTGCTTTAGAAGAAAATAATTTAGATTCTCTGATTGATCCAAGGCTTCAGAATGAATTTGACCCTAGTGAGATGACTCGTATGGTAGCATGCGCTGCAGCTTGCACACGCCACTCAGCAAAGCGTCGACCAAGGATGAGCCAGGTTGTGCGCGCCTTAGAAGGAGACGTGTCACTAGCAGATCTTAACGAAGGAGTACGACCTGGACACAGCAGTGTCTACAGTTCTCATGAAAGCTCAGATTATGATACTCAACAATACAAAGAAGACATGATAAAGTTCAGAAAAATGGCATTAGGAACTCAGGAGTATGCCGCAAGCAGCGAGTACAGTGCAGCTACAAGTGAATATGGCTTAAACCCGTCTGGCTCAAGCAGCGAAAACCAAAGCCGCCAGACAACAAGAGAAATGGAATTAAGAAAGATGAAGAACAGTCAAGGATTCAGTGGAAGTTCATGA 1986 0.4924 MSTAPAPSSPPSGNATAPPPSTPAAPPPATPSAPPPSNPPPATPSSPPPATPSAPPPATPSSPPPPKTPSAPPPATPSTPQPTPAAPSTSPPAPTTPSPPEGGNTPPSPPSRGSPPPPRGSDQSPTPPSTKTPPSPPSSSSSLSTGVVVGIAVGAVAILVVFSILCICCRKKKRRRDEEYYGQQHQQPPPQAPKFEPYGGPPNQWQHNAHPPSDHVASMKPPPPPAPIPSRPPSHVAPPPPPPLMSSSGGTGSNYSGGELLPPPSPGLAFSTAKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCSTGFQRLLVYEFVPNNTLEFHLHGNGRPTMDWATRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDLNTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSYGVMLLELLTGRRPVDKNQTYMDDSLVEWARPLLMRALEENNLDSLIDPRLQNEFDPSEMTRMVACAAACTRHSAKRRPRMSQVVRALEGDVSLADLNEGVRPGHSSVYSSHESSDYDTQQYKEDMIKFRKMALGTQEYAASSEYSAATSEYGLNPSGSSSENQSRQTTREMELRKMKNSQGFSGSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi811g00042 661 MobiDBLite consensus disorder prediction 179 267 - -
Vivi811g00042 661 SMART serkin_6 289 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi811g00042 661 CDD STKc_IRAK 295 564 - -
Vivi811g00042 661 PRINTS Proline rich extensin signature 58 74 - -
Vivi811g00042 661 PRINTS Proline rich extensin signature 24 36 - -
Vivi811g00042 661 PRINTS Proline rich extensin signature 36 57 - -
Vivi811g00042 661 PRINTS Proline rich extensin signature 4 20 - -
Vivi811g00042 661 MobiDBLite consensus disorder prediction 1 144 - -
Vivi811g00042 661 MobiDBLite consensus disorder prediction 619 641 - -
Vivi811g00042 661 MobiDBLite consensus disorder prediction 619 661 - -
Vivi811g00042 661 SUPERFAMILY Protein kinase-like (PK-like) 268 562 IPR011009 -
Vivi811g00042 661 FunFam Proline-rich receptor-like protein kinase PERK1 365 573 - -
Vivi811g00042 661 MobiDBLite consensus disorder prediction 216 246 - -
Vivi811g00042 661 Pfam Protein tyrosine and serine/threonine kinase 294 562 IPR001245 GO:0004672|GO:0006468
Vivi811g00042 661 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 154 625 IPR047117 -
Vivi811g00042 661 ProSiteProfiles Protein kinase domain profile. 289 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi811g00042 661 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Vivi811g00042 661 FunFam proline-rich receptor-like protein kinase PERK1 267 364 - -
Vivi811g00042 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Vivi811g00042 661 MobiDBLite consensus disorder prediction 11 135 - -
Vivi811g00042 661 Gene3D Transferase(Phosphotransferase) domain 1 365 572 - -
Vivi811g00042 661 Gene3D Phosphorylase Kinase; domain 1 265 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi811g00042 106 644 Trihelix Transcription Factor Family AT1G70460 48.799 1.04e-168 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Vivi811g00042 PK_Tyr_Ser-Thr 8.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi811g00042 - - gmx:100781944 818.92