Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi811g00037 ATGAAAGAAGGTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCGTCGGGAATATACTGTGACGGATGCAACTGTGTAAATTGTTTCAACAATGTTGATAATGAAGCTGCTAGACGAGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCGAAAATTGCGAGCAGCCCTCAGGGAGCACGCGATAGCAGGGTGGAGGCTGGAGAAGGTGTAATATTAGTAAAACATAACAAGGGTTGCCATTGTAAAAAATCTGGCTGCCTTAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAGAACTGTAAATGCATGGACTGCAAGAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTGTCATGGAGATCATAATAACAACACGTATATTCAGCAAGCGGCAAATGCTGCTATAACTGGAGCTATTGGTTCCTACGGCTATTCATCACCTCCAGTATCAAAGAAACGAAAAGGCCAGGAACTCTTCTTATGGCCTGCAAACAAGGATCCATCAATTGGCAAGCCGGGACAACAGGTAAACCATGTCAAAAACTCAGCACCCTCATCATCATTATCACCCGTCTCAAGTGGTCGTGTTGCAAATGCAACATTAGGTCAGAGTCCATCAAAATTAAAGTACAGGTCTCTTTTAGCAGACATTGTACAACCACACCACCTCAAAGAGCTATGTTCAGTTCTGGTGCTACTATCTGGACAAGCTGCAAAAACACTTGCAGACCAGAAAAATTTAGTGGAAAAGCGTACAGAAGATGAGACACAAACATGCCTTGCTTCTTCAACTCAAGAGCAACTACCAAGTCAAAAAGAAGTTGATATTGAGAAAGCTATGGAAGATGATTGTTCGAGTGCAAATCAAACAGATAAAATCAGTCCAGGTAATTCCTGTTCAGATGGTGCTGACGTCTCAAAAGGGAGACCAATGTCTCCCGGGACTTTAGCCTTGATGTGCGACGAGCAAGATACAATGTTCATGACAACCGCCTCTCCCATTGGGGCAACGACCCAAGCTTGCAACACATCTTCGCAATTTCCTAGTGGACAAGGAGTGACAGAGGTCTATGCTGAACAAGAAAGAGTTGTATTAACACAATTTAGAGATTTTCTCAATAGAGTTATCACTATGGGAGAAATAAATGAGACAAAGTGTTCTTCATTGGCTAGAAGTGAATTAGAGGGTCAAAAGGATCCAATCAACAGTGGAATTGGAAACACCAGTACTGAGACAGTACATCAACAAGAAGCCACTAGCAATGGTGATGCCAAACCTGTAGTTCCACCTACGGCCACAACTTCAACACCTGTGGTCCCTGGTGATACTGCAGCTGAAAATGGTGAAACTAAGCTGAATATGGAAAAAGATGTATGA 1446 0.4239 MKEGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPQGARDSRVEAGEGVILVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALCHGDHNNNTYIQQAANAAITGAIGSYGYSSPPVSKKRKGQELFLWPANKDPSIGKPGQQVNHVKNSAPSSSLSPVSSGRVANATLGQSPSKLKYRSLLADIVQPHHLKELCSVLVLLSGQAAKTLADQKNLVEKRTEDETQTCLASSTQEQLPSQKEVDIEKAMEDDCSSANQTDKISPGNSCSDGADVSKGRPMSPGTLALMCDEQDTMFMTTASPIGATTQACNTSSQFPSGQGVTEVYAEQERVVLTQFRDFLNRVITMGEINETKCSSLARSELEGQKDPINSGIGNTSTETVHQQEATSNGDAKPVVPPTATTSTPVVPGDTAAENGETKLNMEKDV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi811g00037 481 PANTHER TESMIN/TSO1-RELATED 3 404 IPR028307 -
Vivi811g00037 481 MobiDBLite consensus disorder prediction 193 221 - -
Vivi811g00037 481 MobiDBLite consensus disorder prediction 303 333 - -
Vivi811g00037 481 MobiDBLite consensus disorder prediction 424 464 - -
Vivi811g00037 481 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 95 129 IPR005172 -
Vivi811g00037 481 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 9 44 IPR005172 -
Vivi811g00037 481 MobiDBLite consensus disorder prediction 309 324 - -
Vivi811g00037 481 MobiDBLite consensus disorder prediction 190 221 - -
Vivi811g00037 481 SMART CXC_2 92 133 IPR033467 -
Vivi811g00037 481 SMART CXC_2 7 47 IPR033467 -
Vivi811g00037 481 MobiDBLite consensus disorder prediction 418 481 - -
Vivi811g00037 481 ProSiteProfiles CRC domain profile. 8 132 IPR005172 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi811g00037 2 461 CPP Transcription Factor Family AT4G29000 58.495 1.01e-180 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Vivi811g00037 TCR 2.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi811g00037 - - gmx:100777698 761.14