Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi811g00035 ATGGAGGAAGGTGAAGGAGGAGATTGTGGTCGGAAGAATGTTCCGTTGGTTTCGGAGTTTGTTGTGGCTGCTTCACCGGCGGCGGCTGCGACGGCGTGGTTGGATGCTCCGGCGAAGAAGCCAGCGAGACAGCTAGATTTCAATGTTGTGATGGAACAGTCGAAGCCACCTCAGCTGCAGACAACAACGACTGTGACGGTGCAGAAACCGGCGGGGAGTTTGCCTTTGCCGCCGATGGGACTTCACGCTTCTGTGAGGGTTGGGAAACCAGAATCTCCCAAACCAAGATCAAGACCTAACTTTGAAATGAAAGAAGGTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCGTCGGGAATATACTGTGACGGATGCAACTGTGTAAATTGTTTCAACAATGTTGATAATGAAGCTGCTAGACGAGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCGAAAATTGCGAGCAGCCCTCAGGGAGCACGCGATAGCAGGGTAAGTAGGTTTAACTTTTTGTTGCAGGTGGAGGCTGGAGAAGGTGTAATATTAGTAAAACATAACAAGGGTTGCCATTGTAAAAAATCTGGCTGCCTTAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAGAACTGTAAATGCATGGACTGCAAGAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTGTCATGGAGATCATAATAACAACACGTATATTCAGCAAGCGGCAAATGCTGCTATAACTGGAGCTATTGGTTCCTACGGCTATTCATCACCTCCAGTATCAAAGAAACGAAAAGGCCAGGAACTCTTCTTATGGCCTGCAAACAAGGATCCATCAATTGGCAAGCCGGGACAACAGGTAAACCATGTCAAAAACTCAGCACCCTCATCATCATTATCACCCGTCTCAAGTGGTCGTGTTGCAAATGCAACATTAGGTCAGAGTCCATCAAAATTAAAGTACAGGTCTCTTTTAGCAGACATTGTACAACCACACCACCTCAAAGAGCTATGTTCAGTTCTGGTGCTACTATCTGGACAAGCTGCAAAAACACTTGCAGACCAGAAAAATTTAGTGGAAAAGCGTACAGAAGATGAGACACAAACATGCCTTGCTTCTTCAACTCAAGAGCAACTACCAAGTCAAAAAGAAGTTGATATTGAGAAAGCTATGGAAGATGATTGTTCGAGTGCAAATCAAACAGATAAAATCAGTCCAGGTAATTCCTGTTCAGATGGTGCTGACGTCTCAAAAGGGAGACCAATGTCTCCCGGGACTTTAGCCTTGATGTGCGACGAGCAAGATACAATGTTCATGACAACCGCCTCTCCCATTGGGGCAACGACCCAAGCTTGCAACACATCTTCGCAATTTCCTAGTGGACAAGGAGTGACAGAGGTCTATGCTGAACAAGAAAGAGTTGTATTAACACAATTTAGAGATTTTCTCAATAGAGTTATCACTATGGGAGAAATAAATGAGACAAAGTGTTCTTCATTGGCTAGAAGTGAATTAGAGGGTCAAAAGGATCCAATCAACAGTGGAATTGGAAACACCAGTACTGAGACAGTACATCAACAAGAAGCCACTAGCAATGGTGATGCCAAACCTGTAGTTCCACCTACGGCCACAACTTCAACACCTGTGGTCCCTGGTGATACTGCAGCTGAAAATGGTGAAACTAAGCTGAATATGGAAAAAGATGTATGA 1779 0.4435 MEEGEGGDCGRKNVPLVSEFVVAASPAAAATAWLDAPAKKPARQLDFNVVMEQSKPPQLQTTTTVTVQKPAGSLPLPPMGLHASVRVGKPESPKPRSRPNFEMKEGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPQGARDSRVSRFNFLLQVEAGEGVILVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALCHGDHNNNTYIQQAANAAITGAIGSYGYSSPPVSKKRKGQELFLWPANKDPSIGKPGQQVNHVKNSAPSSSLSPVSSGRVANATLGQSPSKLKYRSLLADIVQPHHLKELCSVLVLLSGQAAKTLADQKNLVEKRTEDETQTCLASSTQEQLPSQKEVDIEKAMEDDCSSANQTDKISPGNSCSDGADVSKGRPMSPGTLALMCDEQDTMFMTTASPIGATTQACNTSSQFPSGQGVTEVYAEQERVVLTQFRDFLNRVITMGEINETKCSSLARSELEGQKDPINSGIGNTSTETVHQQEATSNGDAKPVVPPTATTSTPVVPGDTAAENGETKLNMEKDV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi811g00035 592 PANTHER TESMIN/TSO1-RELATED 47 515 IPR028307 -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 304 332 - -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 301 332 - -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 535 575 - -
Vivi811g00035 592 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 111 146 IPR005172 -
Vivi811g00035 592 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 206 240 IPR005172 -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 89 108 - -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 420 435 - -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 85 108 - -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 414 444 - -
Vivi811g00035 592 SMART CXC_2 203 244 IPR033467 -
Vivi811g00035 592 SMART CXC_2 109 149 IPR033467 -
Vivi811g00035 592 ProSiteProfiles CRC domain profile. 110 243 IPR005172 -
Vivi811g00035 592 MobiDBLite consensus disorder prediction 529 592 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi811g00035 37 572 CPP Transcription Factor Family AT4G29000 52.000 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Vivi811g00035 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi811g00035 - - gmx:100818116 813.142