Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi80g00010 ATGGGGAAGAAAGGAAGTGGTAGTTCATGGTTAACTGCTGTTAAAAGGGCATTCAGATCTCCAACTAAAGATAGTGAGAAGAGAAGTGGTAGAAGAAGAGAAGATTGTGATCAAGAAGAAGATGAAGAAAAGAAGAGAGAAAAAAGAAGATGGATTTTTAGAAAACCTGTTGTGAATCATGAAACTGTGAACAGTAATACTCAACAAAGTACACCAACAAAATTGAAGCATGATGTTGTTGTTGCTACTGCTGCTGCTACAAGTGTGGCTTCTTCCAGAGCAGATCAAGATGAGAAGCATGCTCTTGCTGTGGCTATGGCTACTGCTGAGGCAGCAAGAGCCACTGCTCAAGCTGCTATGGAAGTTGCAAGGTTGACTAAGCCGGCGAATTATGCTAGAGAGCATTGTGCTGCTGTTGTGATACAAACTTCTTTCAGAGGATATTTGGCGAGAAGAGCGCTTCGAGCACTAAAGGGATTGGTGAAGTTGCAAGCATTAGTGAGAGGTCACAATGTTAGGAAACAAGCAAAAATGACACTTAGGTGCATGCAAGCTCTTGTTAGAGTGCAAGCAAGAGTTCTTGACCAAAGGGTAAGGTCTACTTCACATGATGGAAGTAGAAAATCAACTTTTAGTGACACTACTAGTGTTTGGGATTCGCGGTATCTTCAAGACATTTCAGACAGAAAATCATTATCGAGAGAAGGAAGTAGTGTTGCAGATGATTGGGATGATCGTCCACACACAGTTGAAGAAGTTAAGGCCATGTTGCAACAGAGGAAGGAACAAGCTATGAAGAGAGAAAAGTCCTTGTCACAAGCTTTTTCACAACAGATTTGGAGAAATGGAAGGACATCATCAATTGGAAATGAAGATGAACTTGAAGAGAGACCAAAATGGTTAGACAGATGGATGGCTACAAAACCATGGGAGAATAGAGGAAGAGCTTCAACTGATCAAAGAGATTCTATCAAGACAGTAGAAGTTGACACTTCTCAACCTTATTCATATCTAGGAACAAACTACAGAAGATCACATCCAAATTACCAATACAACCCACACCATCAACCACAAAGACACTCCATTGCTTCACCACTCCATAGAACACACCAAAATGGCTCCCATAACCAATCTGTAACCACTCCGTCTCCGGCAAAGTCAAGACCTATCCAAGTCCGGTCGTCAAGTCCTCGTTGTGTTAGAGAAGATAGAAGCTACCACCACACATCTCAAACACCAAGCTTAAGGTCTAACTACCATTACAATGGAAACTTGTACCAAAATAGTAGTAGGGTTGGAACAAGCAATGGTGTTTCCAATGCTACACCTACATTGCCTAATTACATGCAAGCGACCGAGTCTGCAAAGGCTCGAATTCGCTCGCAAAGTGCGCCGAGGCAAAGGCCATCGACGCCAGAGCGAGATAGATCCGGATCAGTAAAGAAAAGACTTTCTTTCCCTGCTCCGGATCCTTACAATGTAGGAGGAGTTGGTTATGGAAACTATGGACATAGTTTAAGAAGTCCTAGTTTCAAGAGTGTGAATGTAACATCACATTTCGGGTTAGAGCAACATTCTAACTACTCTTCTTGTTGCACCGAGAGTCTCGGTGGCGAGGTTTCGCCTTCTTCAACCGGTGACCTCAGAAGGTGGTTGAGATGA 1662 0.4278 MGKKGSGSSWLTAVKRAFRSPTKDSEKRSGRRREDCDQEEDEEKKREKRRWIFRKPVVNHETVNSNTQQSTPTKLKHDVVVATAAATSVASSRADQDEKHALAVAMATAEAARATAQAAMEVARLTKPANYAREHCAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVRSTSHDGSRKSTFSDTTSVWDSRYLQDISDRKSLSREGSSVADDWDDRPHTVEEVKAMLQQRKEQAMKREKSLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDSIKTVEVDTSQPYSYLGTNYRRSHPNYQYNPHHQPQRHSIASPLHRTHQNGSHNQSVTTPSPAKSRPIQVRSSSPRCVREDRSYHHTSQTPSLRSNYHYNGNLYQNSSRVGTSNGVSNATPTLPNYMQATESAKARIRSQSAPRQRPSTPERDRSGSVKKRLSFPAPDPYNVGGVGYGNYGHSLRSPSFKSVNVTSHFGLEQHSNYSSCCTESLGGEVSPSSTGDLRRWLR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi80g00010 553 Coils Coil 254 274 - -
Vivi80g00010 553 ProSiteProfiles IQ motif profile. 134 162 IPR000048 GO:0005515
Vivi80g00010 553 FunFam IQ-domain 11 133 184 - -
Vivi80g00010 553 Gene3D - 132 185 - -
Vivi80g00010 553 Pfam Protein of unknown function (DUF4005) 396 500 IPR025064 -
Vivi80g00010 553 PANTHER IQ-DOMAIN 5-RELATED 1 488 - -
Vivi80g00010 553 MobiDBLite consensus disorder prediction 311 494 - -
Vivi80g00010 553 MobiDBLite consensus disorder prediction 19 48 - -
Vivi80g00010 553 MobiDBLite consensus disorder prediction 327 394 - -
Vivi80g00010 553 Pfam IQ calmodulin-binding motif 135 155 IPR000048 GO:0005515
Vivi80g00010 553 Pfam IQ calmodulin-binding motif 161 177 IPR000048 GO:0005515
Vivi80g00010 553 ProSiteProfiles IQ motif profile. 158 185 IPR000048 GO:0005515
Vivi80g00010 553 SMART iq_5 156 177 IPR000048 GO:0005515
Vivi80g00010 553 SMART iq_5 133 155 IPR000048 GO:0005515
Vivi80g00010 553 MobiDBLite consensus disorder prediction 531 553 - -
Vivi80g00010 553 MobiDBLite consensus disorder prediction 311 326 - -
Vivi80g00010 553 MobiDBLite consensus disorder prediction 1 48 - -
Vivi80g00010 553 MobiDBLite consensus disorder prediction 410 468 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi80g00010 1 553 IQD Protein Family AT1G01110 57.317 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi80g00010 - - gmx:100786729 831.247