Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi80g00009 ATGGGGAAGAAAGGAAGTGGTAGTTCATGGTTAACTGCTGTTAAAAGGGCATTCAGATCTCCAACTAAAGATAGTGAGAAGAGAAGTGGTAGAAGAAGAGAAGATTGTGATCAAGAAGAAGATGAAGAAAAGAGAGAAAAAAGAAGATGGATTTTTAGAAAACCTGTTGTGAATCATGAAACTGTGAACAGTAATACTCAACAAAGTACACCAACAAAATTGAAGCATGATGTTGTTGTTGCTACTGCTGCTGCTACAAGTGTGGCTTCTTCCAGAGCAGATCAAGATGAGAAGCATGCTCTTGCTGTGGCTATGGCTACTGCTGAGGCAGCAAGAGCCACTGCTCAAGCTGCTATGGAAGTTGCAAGGTTGACTAAGCCGGCGAATTATGCTAGAGAGCATTGTGCTGCTGTTGTGATACAAACTTCTTTCAGAGGATATTTGGCGAGAAGAGCGCTTCGAGCACTAAAGGGATTGGTGAAGTTGCAAGCATTAGTGAGAGGTCACAATGTTAGGAAACAAGCAAAAATGACACTTAGGTGCATGCAAGCTCTTGTTAGAGTGCAAGCAAGAGTTCTTGACCAAAGGGTAAGGTCTACTTCACATGATGGAAGTAGAAAATCAACTTTTAGTGACACTACTAGTGTTTGGGATTCGCGGTATCTTCAAGACATTTCAGACAGAAAATCATTATCGAGAGAAGGAAGTAGTGTTGCAGATGATTGGGATGATCGTCCACACACAGTTGAAGAAGTTAAGGCCATGTTGCAACAGAGGAAGGAACAAGCTATGAAGAGAGAAAAGTCCTTGTCACAAGCTTTTTCACAACAGATTTGGAGAAATGGAAGGACATCATCAATTGGAAATGAAGATGAACTTGAAGAGAGACCAAAATGGTTAGACAGATGGATGGCTACAAAACCATGGGAGAATAGAGGAAGAGCTTCAACTGATCAAAGAGATTCTATCAAGACAGTAGAAGTTGACACTTCTCAACCTTATTCATATCTAGGAACAAACTACAGAAGATCACATCCAAATTACCAATACAACCCACACCATCAACCACAAAGACACTCCATTGCTTCACCACTCCATAGAACACACCAAAATGGCTCCCATAACCAATCTGTAACCACTCCGTCTCCGGCAAAGTCAAGACCTATCCAAGTCCGGTCGTCAAGTCCTCGTTGTGTTAGAGAAGATAGAAGCTACCACCACACATCTCAAACACCAAGCTTAAGGTCTAACTACCATTACAATGGAAACTTGTACCAAAATAGTAGTAGGGTTGGAACAAGCAATGGTGTTTCCAATGCTACACCTACATTGCCTAATTACATGCAAGCGACCGAGTCTGCAAAGGCTCGAATTCGCTCGCAAAGTGCGCCGAGGCAAAGGCCATCGACGCCAGAGCGAGATAGATCCGGATCAGTAAAGAAAAGACTTTCTTTCCCTGCTCCGGATCCTTACAATGTAGGAGGAGTTGGTTATGGAAACTATGGACATAGTTTAAGAAGTCCTAGTTTCAAGAGTGTGAATGTAACATCACATTTCGGGTTAGAGCAACATTCTAACTACTCTTCTTGTTGCACCGAGAGTCTCGGTGGCGAGGTTTCGCCTTCTTCAACCGGTGACCTCAGAAGGTGGTTGAGATGA 1659 0.428 MGKKGSGSSWLTAVKRAFRSPTKDSEKRSGRRREDCDQEEDEEKREKRRWIFRKPVVNHETVNSNTQQSTPTKLKHDVVVATAAATSVASSRADQDEKHALAVAMATAEAARATAQAAMEVARLTKPANYAREHCAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVRSTSHDGSRKSTFSDTTSVWDSRYLQDISDRKSLSREGSSVADDWDDRPHTVEEVKAMLQQRKEQAMKREKSLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDSIKTVEVDTSQPYSYLGTNYRRSHPNYQYNPHHQPQRHSIASPLHRTHQNGSHNQSVTTPSPAKSRPIQVRSSSPRCVREDRSYHHTSQTPSLRSNYHYNGNLYQNSSRVGTSNGVSNATPTLPNYMQATESAKARIRSQSAPRQRPSTPERDRSGSVKKRLSFPAPDPYNVGGVGYGNYGHSLRSPSFKSVNVTSHFGLEQHSNYSSCCTESLGGEVSPSSTGDLRRWLR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi80g00009 552 MobiDBLite consensus disorder prediction 1 47 - -
Vivi80g00009 552 MobiDBLite consensus disorder prediction 310 493 - -
Vivi80g00009 552 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Vivi80g00009 552 MobiDBLite consensus disorder prediction 326 393 - -
Vivi80g00009 552 Gene3D - 131 184 - -
Vivi80g00009 552 MobiDBLite consensus disorder prediction 310 325 - -
Vivi80g00009 552 Pfam IQ calmodulin-binding motif 160 176 IPR000048 GO:0005515
Vivi80g00009 552 Pfam IQ calmodulin-binding motif 134 154 IPR000048 GO:0005515
Vivi80g00009 552 Pfam Protein of unknown function (DUF4005) 395 499 IPR025064 -
Vivi80g00009 552 PANTHER IQ-DOMAIN 5-RELATED 1 487 - -
Vivi80g00009 552 MobiDBLite consensus disorder prediction 409 467 - -
Vivi80g00009 552 FunFam IQ-domain 11 132 183 - -
Vivi80g00009 552 Coils Coil 253 273 - -
Vivi80g00009 552 MobiDBLite consensus disorder prediction 19 47 - -
Vivi80g00009 552 MobiDBLite consensus disorder prediction 530 552 - -
Vivi80g00009 552 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
Vivi80g00009 552 SMART iq_5 155 176 IPR000048 GO:0005515
Vivi80g00009 552 SMART iq_5 132 154 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi80g00009 1 552 IQD Protein Family AT1G01110 56.370 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi80g00009 - - gmx:100786729 832.017