Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi808g00003 | ATGGCATTCCAATTGCATAATCTCATCAAAATAACTTTCACCCTTCTCTTCATCTCAACTCTAATTCAATCCACAACATCTACATACAACACCACCACAAATTCCACATCAACAACCTACAAAAAGTTCTTAAAGAACCAATGCACCTCAACCACATACCCTAAGGTTTGCTACAAGTCACTTTCCCCGTACACATCAAAAATCAAAACAAATACATTAACACTCACCAAAATCGCTATCTACCTAGCGTTAAAATCGGCAAGAAGTGCATCCCTTACATTGAAAAACCTAAGCTCCAAGAAACTAACACATGCCGAGACATTGGTTGTCGCCGATTGCAGTGAAAACGTCGATGACACGGTGGATTCGCTCGAGCAATCGGCGGACGGGCTTGTGCATTTGAATGGTACTAGAACTAGTGATGAGAGGTTTCAATGGGATACTATAAAGACATGGATGAGTTCGGCTATAACAAATGCGGGGACATGTACGGATGAGTTTGATGAAATGGAAGTGAGATCTTCGGTGCAAAAGAGGATTAAAACAAGTGTTGGGAATCTTGCTTCATTGACTAGTAATGCTCTTGCTTTTGTAAATAGACTTGACTATTAA | 612 | 0.402 | MAFQLHNLIKITFTLLFISTLIQSTTSTYNTTTNSTSTTYKKFLKNQCTSTTYPKVCYKSLSPYTSKIKTNTLTLTKIAIYLALKSARSASLTLKNLSSKKLTHAETLVVADCSENVDDTVDSLEQSADGLVHLNGTRTSDERFQWDTIKTWMSSAITNAGTCTDEFDEMEVRSSVQKRIKTSVGNLASLTSNALAFVNRLDY | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi808g00003 | 203 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 42 | 201 | IPR035513 | - | |
| Vivi808g00003 | 203 | CDD | PMEI-like_3 | 48 | 202 | - | - | |
| Vivi808g00003 | 203 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 37 | 202 | IPR035513 | - | |
| Vivi808g00003 | 203 | SMART | PMEI_2 | 39 | 197 | IPR006501 | GO:0004857 | |
| Vivi808g00003 | 203 | NCBIfam | pectinesterase inhibitor domain | 14 | 201 | IPR006501 | GO:0004857 | |
| Vivi808g00003 | 203 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 15 | 197 | - | - | |
| Vivi808g00003 | 203 | Pfam | Plant invertase/pectin methylesterase inhibitor | 43 | 196 | IPR006501 | GO:0004857 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi808g00003 | 22 | 201 | Carbohydrate Esterase | AT1G53830 | 29.891 | 1.51e-16 | 75.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi808g00003 | - | - | cam:101501841 | 292.737 |