Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi804g00007 ATGGCATTTTGGGGAGTTGAAATCAAACCTGGAAAGCCTTTCACTCACCAATACGATGCTTCCCGAGGACGCCTCCACATTTCAATAGCCACTTTGGGGCTTGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAATAAAAGCCCTGTTTTTCTTTGTGTTCTTTATCCTGGAAAAAGTGAGTCGTTGCAGTTGAATTTGGAGTTTGAAGAATATGGTAATGTTGTTCTCTCCGTCATTGGCCCTCGGAGTATTCATCTCTGTGGTTATTATCTTGCCCGTGGACACTATACCAATACTATGGGTGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACGGAAAGATCTGATCACAGTGACGAAGACGACTACGATGATAGTTTTATTGATGATGACGGTGATACAGTTTTCCCACCATCTCCTGTTTTCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCGAAAAGTTACAAAAGGAAGCCAAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGACGACAATGGCGGTTGTGAAGAAAAGAAAACTATTGGTGACAACATGCATGTTGAATCTCAGGAAATTGATGACGAAAATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACAAAGATGGTGAAGACCGAGAGGATAATACTATTGAAACAACATTGAAAACTGACAATGTTGTCGTGGACAGTCAGACTCACAGGGAGGCTGAACCTTCAGATCAATTGGTAGAACCCTGCTCTGTTTTGGATGTTGGGGATATTAAAAAGTCAATTAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTTGTCATGACCATTCCACCGAACTAGATAATGCTGTGCAAGATGAGCCAAAAATGAACACATCTCAGAATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAAGCCGATGATAACAGGAAAGCTGAACCTTCAGATCAATTGGTAGATCCATGCCCTGTTCTGGAGGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAAGAAACAAAGAGTTCTGCTAATGGCCATTCCGCCGAAATAGGCAACGCCGTGCAGGATGAGCCAAAAATGAACACGACTCAGGATCTTCTGGAAGGAAATGAACAGAATCAGCAGCAAGCTGATGATAAGAAAGTTGAAACCACGGATAAAATACTACCTTTCTCACAGGTTGGTCAGGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGAAGAGACACTTGCTTGTATTAGCAATGTTACTAACCTGCCTCAGGCTCAGGGAAATGAACACAATAGTCAGGACACAGTTAATGGGGATGTTAAGATTTCAGACACTGTTGCACTGCCTTCCACTGAAACAGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAACATTTAAACAAAGCTTCACAACAGCCTGAAGGTGACAATGGAAATGGTGAAGCCAACAAAGAGACAGTAGAGTCTGATAGTCTGATTGATAAATTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAATTGAAAACAATATGGACAACAATGGAAATCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAAAGTAAAAACAAAGGCAATGAAGTTGTAAATTCTGATGTGCCTTTATCCATTGAGCCAAGTACTGAGATGACGAAAGAGGATGGAAATAATACGGAGGATGCCAAGTCTTCCCAAGTCAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACCGGGAAAGCAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAGTGGTGGTTGATTCAAATGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTAAGGGTTGGGATATTGGCCTTGAAGGTATGCAAGTTGGAGAAAAGAGAAGACTTGTGATACCACCGTCAATGACGTCTAAGAAAGATGGAGACAGTGGCAGTATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA 2166 0.4058 MAFWGVEIKPGKPFTHQYDASRGRLHISIATLGLGTAITKSTLQCNVGNKSPVFLCVLYPGKSESLQLNLEFEEYGNVVLSVIGPRSIHLCGYYLARGHYTNTMGESESYGEDIADTETERSDHSDEDDYDDSFIDDDGDTVFPPSPVFNEEEASSDSGRKVTKGSQRRLRKKYQLVESDDNGGCEEKKTIGDNMHVESQEIDDENSLPISSICKNKASGRVLDQEMDDNVDKETVGAGNKDGEDREDNTIETTLKTDNVVVDSQTHREAEPSDQLVEPCSVLDVGDIKKSIKKKKEKEKETKSSCHDHSTELDNAVQDEPKMNTSQNLLAGNEQNQQQADDNRKAEPSDQLVDPCPVLEVGDIKKSKKKKKEKETKSSANGHSAEIGNAVQDEPKMNTTQDLLEGNEQNQQQADDKKVETTDKILPFSQVGQGQDEKPKRKRKERSKEETLACISNVTNLPQAQGNEHNSQDTVNGDVKISDTVALPSTETDSQKKTKKRKKEHLNKASQQPEGDNGNGEANKETVESDSLIDKFSERKEQHPKLTIENNMDNNGNQSEDKKVKKKKKSKNKGNEVVNSDVPLSIEPSTEMTKEDGNNTEDAKSSQVRTLSDGLVIQELETGKANGKIAALGKKISINYTGKLKENGVVVDSNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSMTSKKDGDSGSIPPNSWLVYDFELVKVH 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi804g00007 721 MobiDBLite consensus disorder prediction 287 316 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 435 451 - -
Vivi804g00007 721 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 720 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 171 193 - -
Vivi804g00007 721 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Vivi804g00007 721 Gene3D - 586 721 IPR046357 GO:0003755
Vivi804g00007 721 MobiDBLite consensus disorder prediction 122 138 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 317 339 - -
Vivi804g00007 721 Gene3D Nucleoplasmin core domain 1 99 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 576 593 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 393 410 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 452 492 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 361 380 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 218 607 - -
Vivi804g00007 721 SUPERFAMILY FKBP-like 593 720 - -
Vivi804g00007 721 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 633 721 IPR001179 GO:0003755
Vivi804g00007 721 MobiDBLite consensus disorder prediction 105 193 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 221 253 - -
Vivi804g00007 721 MobiDBLite consensus disorder prediction 521 547 - -
Vivi804g00007 721 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 630 718 IPR001179 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi804g00007 633 718 Calmodulin-binding Proteins AT5G48570 42.529 9.77e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi804g00007 K14826 - qsu:112027819 431.024