Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi804g00006 | ATGGCATTTTGGGGAGTTGAAATCAAACCTGGAAAGCCTTTCACTCACCAATACGATGCTTCCCGAGGACGCCTCCACATTTCAATAGCCACTTTGGGGCTTGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAATAAAAGCCCTGTTTTTCTTTGTGTTCTTTATCCTGGAAAAAGTGAGTCGTTGCAGTTGAATTTGGAGTTTGAAGAATATGGTAATGTTGTTCTCTCCGTCATTGGCCCTCGGAGTATTCATCTCTGTGGTTATTATCTTGCCCGTGGACACTATACCAATACTATGGGTGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACGGAAAGATCTGATCACAGTGACGAAGACGACTACGATGATAGTTTTATTGATGATGACGGTGATACAGTTTTCCCACCATCTCCTGTTTTCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCGAAAAGTTACAAAAGGAAGCCAAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGACGACAATGGCGGTTGTGAAGAAAAGAAAACTATTGGTGACAACATGCATGTTGAATCTCAGGAAATTGATGACGAAAATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACAAAGATGGTGAAGACCGAGAGGATAATACTATTGAAACAACATTGAAAACTGACAATGTTGTCGTGGACAGTCAGACTCACAGCAGGGAGGCTGAACCTTCAGATCAATTGGTAGAACCCTGCTCTGTTTTGGATGTTGGGGATATTAAAAAGTCAATTAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTTGTCATGACCATTCCACCGAACTAGATAATGCTGTGCAAGATGAGCCAAAAATGAACACATCTCAGAATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAAGCCGATGATAAGAAAGCTGAACCTTCAGATCAATTGGTAGATCCATGCCCTGTTCTGGAGGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAAGAAACAAAGAGTTCTGCTAATGGCCATTCCGCCGAAATAGGCAACGCCGTGCAGGATGAGCCAAAAATGAACACGACTCAGGATCTTCTGGAAGGAAATGAACAGAATCAGCAGCAAGCTGATGATAAGAAAGTTGAAACCACGGATAAAATACTACCTTTCTCACAGGTTGGTCAGGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGAAGAGACACTTGCTTGTATTAGCAATGTTACTAACCTGCCTCAGGCTCAGGGAAATGAACACAATAGTCAGGACACAGTTAATGGGGATGTTAAGATTTCAGACACTGTTGCACTGCCTTCCACTGAAACAGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAACATTTAAACAAAGCTTCACAACAGCCTGAAGGTGACAATGGAAATGGTGAAGCCAACAAAGAGACAGTAGAGTCTGATAGTCTGATTGATAAATTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAATTGAAAACAATATGGACAACAATGGAAATCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAAAGTAAAAACAAAGGCAATGAAGTTGTAAATTCTGATGTGCCTTTATCCATTGAGCCAAGTACTGAGATGACGAAAGAGGATGGAAATAATACGGAGGATGCCAAGTCTTCCCAAGTCAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACCGGGAAAGCAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAGTGGTGGTTGATTCAAATGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTAAGGGTTGGGATATTGGCCTTGAAGGTATGCAAGTTGGAGAAAAGAGAAGACTTGTGATACCACCGTCAATGACGTCTAAGAAAGATGGAGACAGTGGCAGTATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA | 2166 | 0.4058 | MAFWGVEIKPGKPFTHQYDASRGRLHISIATLGLGTAITKSTLQCNVGNKSPVFLCVLYPGKSESLQLNLEFEEYGNVVLSVIGPRSIHLCGYYLARGHYTNTMGESESYGEDIADTETERSDHSDEDDYDDSFIDDDGDTVFPPSPVFNEEEASSDSGRKVTKGSQRRLRKKYQLVESDDNGGCEEKKTIGDNMHVESQEIDDENSLPISSICKNKASGRVLDQEMDDNVDKETVGAGNKDGEDREDNTIETTLKTDNVVVDSQTHSREAEPSDQLVEPCSVLDVGDIKKSIKKKKEKEKETKSSCHDHSTELDNAVQDEPKMNTSQNLLAGNEQNQQQADDKKAEPSDQLVDPCPVLEVGDIKKSKKKKKEKETKSSANGHSAEIGNAVQDEPKMNTTQDLLEGNEQNQQQADDKKVETTDKILPFSQVGQGQDEKPKRKRKERSKEETLACISNVTNLPQAQGNEHNSQDTVNGDVKISDTVALPSTETDSQKKTKKRKKEHLNKASQQPEGDNGNGEANKETVESDSLIDKFSERKEQHPKLTIENNMDNNGNQSEDKKVKKKKKSKNKGNEVVNSDVPLSIEPSTEMTKEDGNNTEDAKSSQVRTLSDGLVIQELETGKANGKIAALGKKISINYTGKLKENGVVVDSNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSMTSKKDGDSGSIPPNSWLVYDFELVKVH | 721 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 435 | 451 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 171 | 193 | - | - | |
| Vivi804g00006 | 721 | Pfam | Nucleoplasmin-like domain | 3 | 95 | IPR041232 | - | |
| Vivi804g00006 | 721 | Gene3D | - | 586 | 721 | IPR046357 | GO:0003755 | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 122 | 138 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 576 | 593 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 393 | 410 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 452 | 492 | - | - | |
| Vivi804g00006 | 721 | Gene3D | Nucleoplasmin core domain | 1 | 99 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 361 | 380 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 218 | 607 | - | - | |
| Vivi804g00006 | 721 | SUPERFAMILY | FKBP-like | 593 | 720 | - | - | |
| Vivi804g00006 | 721 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 633 | 721 | IPR001179 | GO:0003755 | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 105 | 193 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 288 | 317 | - | - | |
| Vivi804g00006 | 721 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 41 | 420 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 221 | 253 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 521 | 547 | - | - | |
| Vivi804g00006 | 721 | MobiDBLite | consensus disorder prediction | 318 | 339 | - | - | |
| Vivi804g00006 | 721 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 630 | 718 | IPR001179 | GO:0003755 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi804g00006 | 633 | 718 | Calmodulin-binding Proteins | AT5G48570 | 42.529 | 9.86e-15 | 75.9 |