Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi804g00005 ATGGCATTTTGGGGAGTTGAAATCAAACCTGGAAAGCCTTTCACTCACCAATACGATGCTTCCCGAGGACGCCTCCACATTTCAATAGCCACTTTGGGGCTTGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAATAAAAGCCCTGTTTTTCTTTGTGTTCTTTATCCTGGAAAAAGTGAGTCGTTGCAGTTGAATTTGGAGTTTGAAGAATATGGTAATGTTGTTCTCTCCGTCATTGGCCCTCGGAGTATTCATCTCTGTGGTTATTATCTTGCCCGTGGACACTATACCAATACTATGGGTGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACGGAAAGATCTGATCACAGTGACGAAGACGACTACGATGATAGTTTTATTGATGATGACGGTGATACAGTTTTCCCACCATCTCCTGTTTTCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCGAAAAGTTACAAAAGGAAGCCAAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGACGACAATGGCGGTTGTGAAGAAAAGAAAACTATTGGTGACAACATGCATGTTGAATCTCAGGAAATTGATGACGAAAATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACAAAGATGGTGAAGACCGAGAGGATAATACTATTGAAACAACATTGAAAACTGACAATGTTGTCGTGGACAGTCAGACTCACAGCAGGGAGGCTGAACCTTCAGATCAATTGGTAGAACCCTGCTCTGTTTTGGATGTTGGGGATATTAAAAAGTCAATTAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTTGTCATGACCATTCCACCGAACTAGATAATGCTGTGCAAGATGAGCCAAAAATGAACACATCTCAGAATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAAGCCGATGATAACAGGAAAGCTGAACCTTCAGATCAATTGGTAGATCCATGCCCTGTTCTGGAGGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAAGAAACAAAGAGTTCTGCTAATGGCCATTCCGCCGAAATAGGCAACGCCGTGCAGGATGAGCCAAAAATGAACACGACTCAGGATCTTCTGGAAGGAAATGAACAGAATCAGCAGCAAGCTGATGATAAGAAAGTTGAAACCACGGATAAAATACTACCTTTCTCACAGGTTGGTCAGGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGAAGAGACACTTGCTTGTATTAGCAATGTTACTAACCTGCCTCAGGCTCAGGGAAATGAACACAATAGTCAGGACACAGTTAATGGGGATGTTAAGATTTCAGACACTGTTGCACTGCCTTCCACTGAAACAGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAACATTTAAACAAAGCTTCACAACAGCCTGAAGGTGACAATGGAAATGGTGAAGCCAACAAAGAGACAGTAGAGTCTGATAGTCTGATTGATAAATTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAATTGAAAACAATATGGACAACAATGGAAATCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAAAGTAAAAACAAAGGCAATGAAGTTGTAAATTCTGATGTGCCTTTATCCATTGAGCCAAGTACTGAGATGACGAAAGAGGATGGAAATAATACGGAGGATGCCAAGTCTTCCCAAGTCAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACCGGGAAAGCAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAGTGGTGGTTGATTCAAATGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTAAGGGTTGGGATATTGGCCTTGAAGGTATGCAAGTTGGAGAAAAGAGAAGACTTGTGATACCACCGTCAATGACGTCTAAGAAAGATGGAGACAGTGGCAGTATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA 2169 0.4062 MAFWGVEIKPGKPFTHQYDASRGRLHISIATLGLGTAITKSTLQCNVGNKSPVFLCVLYPGKSESLQLNLEFEEYGNVVLSVIGPRSIHLCGYYLARGHYTNTMGESESYGEDIADTETERSDHSDEDDYDDSFIDDDGDTVFPPSPVFNEEEASSDSGRKVTKGSQRRLRKKYQLVESDDNGGCEEKKTIGDNMHVESQEIDDENSLPISSICKNKASGRVLDQEMDDNVDKETVGAGNKDGEDREDNTIETTLKTDNVVVDSQTHSREAEPSDQLVEPCSVLDVGDIKKSIKKKKEKEKETKSSCHDHSTELDNAVQDEPKMNTSQNLLAGNEQNQQQADDNRKAEPSDQLVDPCPVLEVGDIKKSKKKKKEKETKSSANGHSAEIGNAVQDEPKMNTTQDLLEGNEQNQQQADDKKVETTDKILPFSQVGQGQDEKPKRKRKERSKEETLACISNVTNLPQAQGNEHNSQDTVNGDVKISDTVALPSTETDSQKKTKKRKKEHLNKASQQPEGDNGNGEANKETVESDSLIDKFSERKEQHPKLTIENNMDNNGNQSEDKKVKKKKKSKNKGNEVVNSDVPLSIEPSTEMTKEDGNNTEDAKSSQVRTLSDGLVIQELETGKANGKIAALGKKISINYTGKLKENGVVVDSNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSMTSKKDGDSGSIPPNSWLVYDFELVKVH 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi804g00005 722 Gene3D - 587 722 IPR046357 GO:0003755
Vivi804g00005 722 MobiDBLite consensus disorder prediction 171 193 - -
Vivi804g00005 722 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Vivi804g00005 722 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 421 - -
Vivi804g00005 722 SUPERFAMILY FKBP-like 594 721 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 577 594 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 122 138 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 436 452 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 219 608 - -
Vivi804g00005 722 Gene3D Nucleoplasmin core domain 1 99 - -
Vivi804g00005 722 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 634 722 IPR001179 GO:0003755
Vivi804g00005 722 MobiDBLite consensus disorder prediction 318 340 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 522 548 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 394 411 - -
Vivi804g00005 722 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 631 719 IPR001179 GO:0003755
Vivi804g00005 722 MobiDBLite consensus disorder prediction 105 193 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 453 493 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 288 317 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 362 381 - -
Vivi804g00005 722 MobiDBLite consensus disorder prediction 221 253 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi804g00005 634 719 Calmodulin-binding Proteins AT5G48570 42.529 9.71e-15 75.9