Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi801g00003 ATGTCCGCTATGAACCATATTCAGCATTCACAACAATTCACAAACACTCACACACACACAAAAACAATAGTTTCAAATAATATGGCACCTCTTATACTGACAGTGTCGCAAGATGGAACTGGAAACTACAGAACGGTACAAGAAGCCATTGATGCAGTGCCACTCCGCAACACTTGCCGAACGGTGATAAGGATATCACCGGGAATCTACCGGCAGCCACTATATGTTCCGAAAACTAAGAACTTCATCACTTTCGTTGGTTTGTTTCCTGGCGATACTGTTCTGACATGGAACAACACTGCCAATAAAATTGATCACCATCAAGGTTCTAAGGTGATAGGGAATGGGACTTTTGGTTGTGGAAGTACTATCGTGGAAGGAGAAGATTTTATTGCTGAGAATATTACGTTTGAAAATTCTTCTCCTGAGGGTTCAGGACAAGCGGTGGCAGTTAGAATAACAGCCGATCGATGTGCATTCTATGATTGCAGGTTCCTTGGATGGCAGGACACACTGTATTTGCATTATGGTAAACTATATCTGAGAGATTGTTATATTGAAGGAAGTGTGGACTTTATTTTTGGCAATAGCACTGCACTCTTGGAGCATTGTCATATTCATTGCAAGTCTGCGGGATTCATAACTGCACAAAGTAGGAAATCTCCACATGAAAAAACTGGTTTTGTATTCCTGAGATGTGTTATCACGGGAAATGGAGGAAGTTCATATACATATCTTGGAAGGCCATGGGGACCTTATGGAAGAGTGGTGTTTGCATTTACTTATATGGATCAATGTATAAAACATGTTGGCTGGAATAATTGGGGGAATGTTGAAAATGAAACAAGTGCATGCTTCTATGAATACAGGTGTTTTGGATTGGGTTTTGTTCCATCGAAACGTGTGAAGTGGGCTAAGATGTTAAAGGATAAAGAAGTTGAACAGTTTCTGATGCATAGCTTCATTGATCCAGAACCACAAAAACCTTGGCTAGCTCAAAAAATGGCTTTAAGGATTCCATATTCTGCATAG 1032 0.4031 MSAMNHIQHSQQFTNTHTHTKTIVSNNMAPLILTVSQDGTGNYRTVQEAIDAVPLRNTCRTVIRISPGIYRQPLYVPKTKNFITFVGLFPGDTVLTWNNTANKIDHHQGSKVIGNGTFGCGSTIVEGEDFIAENITFENSSPEGSGQAVAVRITADRCAFYDCRFLGWQDTLYLHYGKLYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGFVFLRCVITGNGGSSYTYLGRPWGPYGRVVFAFTYMDQCIKHVGWNNWGNVENETSACFYEYRCFGLGFVPSKRVKWAKMLKDKEVEQFLMHSFIDPEPQKPWLAQKMALRIPYSA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi801g00003 343 Gene3D - 31 337 IPR012334 -
Vivi801g00003 343 ProSitePatterns Pectinesterase signature 2. 186 195 IPR033131 -
Vivi801g00003 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 26 325 - -
Vivi801g00003 343 Pfam Pectinesterase 34 323 IPR000070 GO:0030599|GO:0042545
Vivi801g00003 343 FunFam Pectinesterase 29 336 - -
Vivi801g00003 343 SUPERFAMILY Pectin lyase-like 29 328 IPR011050 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi801g00003 32 336 Carbohydrate Esterase AT5G47500 37.224 1.48e-68 217