Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi800g00003 ATGGTAGGAGTAGCATTCGATGTCGGAGCCGTTCCTTTCAACCCCGACGGATGGGGCCCAATGGACTCCTCCACCACCGCCGCCGCCAACAACAACGCCAACAACCTCCCTCTCAACGTCCCCTTCGCCCCTTTCTCCCGCTCCGACAAACTCGGCCGAATTGCCGATTGGACCCGCAACTTCAACAACCAAACCCGATCCAAAAACCCCGCTGACTCCGCCTTCGATTTCACCCTCGATGATTCCTTCCCTGGCAACACCGATGACGACGCTACATTCCGCTTAGTCGACGGTAAACCTCCACCCCGTCCTAAATTCGGCCCGAAATGGAGATACCAGCAGCAACGGCAACTTCCTCAGCGTCGCGATGAGGAAGTCGAAGCGAAGAAACGTGAGGCGGAGAAGGAGAGAGCTCGTCGCGATCGGCTTTACCATCAGAATCGGTCGAACCCTAATAATCCTCGACGGGAAGCCGCGGTTTGTAAATCGTCAGTTGATATTCAGCCGGAGTGGAATATGCATGAACAGCTCCCGTTTTCGACTTTCACTAAGCTGTCCTACAATGTTCCTGAGCCTGAAGATCTTCTCCTATGTGGTGCTCTTGAGAATTATGATCGTACATTCGATAGAATTAACCCGAAGAATGAGCGTCGGCTCGAGAGGTTTAAGAATCGGAACTTCTTCAAGGTTACAACCACTGATGACCCTGTTATTAGGAGGCTTGCGAATGAGGATAAAGCGACGGTTTTTGCAACAGATACGATTCTCTCAACTCTCATGTGTGCTCCTAGGTCTGTTTATTCCTGGGATATTGTTGTTCAGCGTGTTGGGAATAAGTTGTTTTTTGATAAACGTGATGGGTCGCAGTTGGATTTGCTTTCGGTTCATGAGACGTCGCAGGAGCCTTTGCCTGAAGCTAAAGATGATATTAACTCTGCTCATTCTTTGAGTGTTGAAGCTGCTTATATCAATCAGAATTTCTCTCAGCAGGTGTTGATTAGGGATGGGAACAAGGTTACTTTTGATGAGCCTAACCCTTTTGCTAACGAGGGTGAAGAGGTTGCTTCGGTTGCTTATAGGTATAGGAGGTGGAAGCTTGATAATGATATGTATCTTGTTGCTAGGTGTGAGGTGCATAGTGTTGTTGAATTGAATAAGCAAAGGTCGTTCCTTACTGTGAATGCTTTGAATGAGTTTGATCCGAAGTATTCAGGGGTTGATTGGAGGCAGAAGTTGGAAACTCAAAGAGGTGCTGTTTTGGCTACTGAGCTCAAGAACAATGCTAACAAGTTGGCTAAGTGGACTGCACAAGCTCTTTTGGGTAGTGCTGATATGATGAAGTTGGGTTATGTGTCTCGGATTCATCCTCGGGACCATTTTAATCATGTTATCTTGGGCGTGGTTGGATATAAACCCAAGGATTTTGCGGCACAAATTAATTTGAACGCCAACAACATGTGGGGTATTGTGAAGTCTATTGTGGACATGTGTATGAAGATGAATGAGGGGAAATATGTTATTGTGAAGGATCCATCTAAGCCTCAGATTAGGATTTATGAGGTTCCGGCTGATGCATTTGAGAATGACTATGTGGAGGAGCCTCTTCCGGAAGATGAACAAGTTCAGCCTACGGCAGAGGGTGCTGATGGTGGAGAGGAAGCTGCTGCTACTGCTATAAATGACGTGGAAGATAAGCCAATTGATGCTCAAGCTTAA 1716 0.4709 MVGVAFDVGAVPFNPDGWGPMDSSTTAAANNNANNLPLNVPFAPFSRSDKLGRIADWTRNFNNQTRSKNPADSAFDFTLDDSFPGNTDDDATFRLVDGKPPPRPKFGPKWRYQQQRQLPQRRDEEVEAKKREAEKERARRDRLYHQNRSNPNNPRREAAVCKSSVDIQPEWNMHEQLPFSTFTKLSYNVPEPEDLLLCGALENYDRTFDRINPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLDNDMYLVARCEVHSVVELNKQRSFLTVNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLGSADMMKLGYVSRIHPRDHFNHVILGVVGYKPKDFAAQINLNANNMWGIVKSIVDMCMKMNEGKYVIVKDPSKPQIRIYEVPADAFENDYVEEPLPEDEQVQPTAEGADGGEEAAATAINDVEDKPIDAQA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi800g00003 571 MobiDBLite consensus disorder prediction 116 146 - -
Vivi800g00003 571 PIRSF Transl_init_eIF3d 1 550 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vivi800g00003 571 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 544 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vivi800g00003 571 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 520 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vivi800g00003 571 MobiDBLite consensus disorder prediction 534 571 - -
Vivi800g00003 571 Coils Coil 121 146 - -
Vivi800g00003 571 MobiDBLite consensus disorder prediction 88 158 - -
Vivi800g00003 571 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 4 532 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi800g00003 1 571 Eukaryotic Initiation Factors Gene Family AT4G20980 76.303 0.0 910