Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g05064 ATGGATAATGATGATTATGATCTATTTTCAATTTTTCATAGCTGCAATGCTAACACCTATACTTCTCCTACCACCATTTTTGAAACTCTTCCTCCACCTCAAACCTTAACAACCACCTCCATCATTACCAATAACATTATGTCTCCTCAAAACACCACACCATCTTACTTTGATGATTTTTCTTTAACCCAAGAAAATAGATCATTCAATTTTTCTCCACTTAAACCAACTGATTTTATAGAACTAGACAAATTAAAAATCAATTTCAATCCCACCACCGTTAACCCCGTCCACACCACAACTATCCCCGTTACCATCACCCCCACCACTACTATCCTAGCTACCTCGGCCACCATTACTACTACCGACATTCCTATCCCTACCCACATAACCACTACTACCATCACTAGCACTATTAATCATGACTTCGATCAAAATTCCAATTTTTTTCATTTCCCATCACTCATCAGCGAACAGCAGATGCAACCGATTGATATTACTGGTCCTGAAAATACTATACCTAATATAAATCCAACGACCATTGTCCCTATCACAACCATCAATAGCCTTACCACCAATATTCCCACACCCATTAGTGCCGCTTTCACTTACCCTAGCCTTCCATCAAACATTTTTACCCCAAGTGTCGTAACCACTACACCTTCTATGAGTACCATGATTAACACTAACCCTAGTTGTCATGGAACTAATAACCATCCTAAGATATATAATTTCCCAAAACACTTTGAAGAACAACATATCCAACAAAATCAAAACATTCAACCGTCTGCTCTTAAGCCCGCCACTTGCATTGAAATCACAACGGCTCATTTTGATCTTGCTTACAATCATCCATCAATTTCTAAACAATATGCAAGAGAGTGCAATCAACTACCAAATCTACAACCCCAGATTAGCTCTGAGATTTTACCAAATGCAGGCCCACAAGGAGAATCCAGCAAAAATAGGAAAAGAAAGCTTGATAATCCAAAGGTAGTAGAATGGCATATGAGCGTAGAGAAGTTGGGTGAAGATCCATGGGAATGGAGAAAATATGGACAAAAACCCATCAAAGGATCTCGATATCCAAGGGACTATTATAAATGTAGCACTTTCAAAGAATGTATGGCGAAAAAACATGTGGAGAAAAAACCAAACAAAGAGAATATTTATGTTGTGACATACATAGGAGAGCACAACCATCCAAAACCCAATGTGGATTGTTCTCCTCATAACAAGACTTCAAAGAAGAGATTCGGTGTCAAAAAATATGGATCTTTGCCAAAGACTAGAAACTCTGATTCTCCCAGTACGGTGATGCCACAGTTTGATCAGCCAGAATGCAGCAATGCTCAAGTTCATATAAGTCAATCAAAAGAAAATCATCAAGATCCTGGACTTATAGGGAGTCATTCACCTACTACTGAGAAATCAGATCATAATCCGATATGA 1452 0.3836 MDNDDYDLFSIFHSCNANTYTSPTTIFETLPPPQTLTTTSIITNNIMSPQNTTPSYFDDFSLTQENRSFNFSPLKPTDFIELDKLKINFNPTTVNPVHTTTIPVTITPTTTILATSATITTTDIPIPTHITTTTITSTINHDFDQNSNFFHFPSLISEQQMQPIDITGPENTIPNINPTTIVPITTINSLTTNIPTPISAAFTYPSLPSNIFTPSVVTTTPSMSTMINTNPSCHGTNNHPKIYNFPKHFEEQHIQQNQNIQPSALKPATCIEITTAHFDLAYNHPSISKQYARECNQLPNLQPQISSEILPNAGPQGESSKNRKRKLDNPKVVEWHMSVEKLGEDPWEWRKYGQKPIKGSRYPRDYYKCSTFKECMAKKHVEKKPNKENIYVVTYIGEHNHPKPNVDCSPHNKTSKKRFGVKKYGSLPKTRNSDSPSTVMPQFDQPECSNAQVHISQSKENHQDPGLIGSHSPTTEKSDHNPI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g05064 483 ProSiteProfiles WRKY domain profile. 338 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g05064 483 MobiDBLite consensus disorder prediction 428 483 - -
Vivi7g05064 483 Pfam WRKY DNA -binding domain 344 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g05064 483 SUPERFAMILY WRKY DNA-binding domain 341 404 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g05064 483 SMART WRKY_cls 343 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g05064 483 MobiDBLite consensus disorder prediction 401 483 - -
Vivi7g05064 483 Gene3D WRKY domain 329 405 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g05064 483 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 246 475 IPR044810 GO:0003700
Vivi7g05064 483 MobiDBLite consensus disorder prediction 305 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g05064 Vivi-Chr7 137157556 137159647 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g05064 315 404 WRKY Transcription Factor Family AT4G01250 51.648 1.96e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g05064 WRKY 2.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g05064 - K13425 vvo:131620244 807.749