Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g05055 ATGGATAATGATGATTATGATCTATTTTCAATTTTTCATAGCTGCAATGCTAACACCTATACTTCTCCTACCACCATTTTTGAAACTCTTCCTCCACCTCAAACCTTAACAACCACCTCCATCATTACCAATAACATTATGTCTCCTCAAAACACCACACCATCTTACTTTGATGATTTTTCTTTAACCCAAGAAAATAGATCATTCAATTTTTCTCCACTTAAACCAACTGATTTTATAGAACTAGACAAATTAAAAATCAATTTCAATCCCACCACCGTTAACCCCGACCACACCACAACTACCCCCGTTACCATCACCCCCACAACTACTATCCTAGCTACCTCGGCCACCATTACTACTACCGACATTCCTATCCCTACCCACATAACCACTACTACCATCACTAGCACTATTAATCATGACTTCGATCAAAATTCCAATTTTTTTCATTTTCCATCATTCATCAGCGAACAGCAGATGCAACCGATTGATATTACTGGTCCTGAAAATACTATACCTAATATAAATCCAACGACCATTGTCCCTATCACAACCATCAACAGCCTTACCACCAATAGCCTTACCACCAATATTCCTACATCCATTAGTGCCGCTTTCACTTACCCTAGCCTTCCATCAAACATTTTTACCCCAAGTGTCGTAACCACTACACCTTCTATGAGTACCATGATTAACACTAACCCTAGTTGTCATGGAACTAATAACCATCCTAAGATATATAATTTCCCAAAACACTTTGAAGAACAACAGATCCAACAAAATCAAACCATTCAACCGCCTGCTCTTAAGCCCGCCACTTGCATTGAAATCACAACGGCTCATTTTGATCTTGCTTACAATCATCCATCAATTGCTAAACAATATGCAAGAGAGTGCAATCAACTACCAAATCTACAACCCCAGATTAGCTCTGAGATTTTACCAAATGCAGGCCCACAAGGAGAATCCAGCAAAAATAGGAAAAGAAAGCTTGATAATCCAAAGGTAGTAGAATGGCATATGAGCGTAGAGAAGTTGGGTGAAGATCCATGGGAATGGAGAAAATATGGACAAAAACCCATTAAAGGATCTCGATATCCAAGGGACTATTATAAATGTAGCACTTTCAAAGAATGTATGGCGAAGAAACATGTGGAGAAAAAAGCAAACAAAGAGAATATTTATATTGTGACATACATAGGAGAGCACAACCATCCAAAACCCAATGTGGATTGTTCTCCTCATAACAAGACTTCAAAGAAGAGATTCGGTGTCAAAAAATATGGATCTTTGCCAAAGACTAGAAACTCTGATTCTCCTAGTACGGTGATGGCACAGTTTGATCAGGCAGAATGCAGCAATGCTCAAGTTCATCTAAGTCAATCAAAAGAAAATCATCAAGATACTGGACTTATAGAGAGTCATTCACCTACTACTGAGAAATCAGATCATAATCCCATATGA 1467 0.3831 MDNDDYDLFSIFHSCNANTYTSPTTIFETLPPPQTLTTTSIITNNIMSPQNTTPSYFDDFSLTQENRSFNFSPLKPTDFIELDKLKINFNPTTVNPDHTTTTPVTITPTTTILATSATITTTDIPIPTHITTTTITSTINHDFDQNSNFFHFPSFISEQQMQPIDITGPENTIPNINPTTIVPITTINSLTTNSLTTNIPTSISAAFTYPSLPSNIFTPSVVTTTPSMSTMINTNPSCHGTNNHPKIYNFPKHFEEQQIQQNQTIQPPALKPATCIEITTAHFDLAYNHPSIAKQYARECNQLPNLQPQISSEILPNAGPQGESSKNRKRKLDNPKVVEWHMSVEKLGEDPWEWRKYGQKPIKGSRYPRDYYKCSTFKECMAKKHVEKKANKENIYIVTYIGEHNHPKPNVDCSPHNKTSKKRFGVKKYGSLPKTRNSDSPSTVMAQFDQAECSNAQVHLSQSKENHQDTGLIESHSPTTEKSDHNPI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g05055 488 SMART WRKY_cls 348 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g05055 488 Gene3D WRKY domain 334 410 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g05055 488 Pfam WRKY DNA -binding domain 349 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g05055 488 SUPERFAMILY WRKY DNA-binding domain 346 409 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g05055 488 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 235 482 IPR044810 GO:0003700
Vivi7g05055 488 MobiDBLite consensus disorder prediction 408 488 - -
Vivi7g05055 488 MobiDBLite consensus disorder prediction 308 323 - -
Vivi7g05055 488 ProSiteProfiles WRKY domain profile. 343 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g05055 488 MobiDBLite consensus disorder prediction 308 334 - -
Vivi7g05055 488 MobiDBLite consensus disorder prediction 433 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g05055 Vivi-Chr7 136877128 136879308 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g05055 320 409 WRKY Transcription Factor Family AT4G01250 52.747 6.83e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g05055 WRKY 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g05055 - K13425 vvo:131620244 819.69