Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g05033 ATGATAGCTAACCCTATCAATGAAAAAACTATTGTTTGGTGGGATTTGGACAATTGTTCCATGCCGCAAATCATCAATGTTGATGAAATTATATTGGGAATCCTTTCAAAACTGCAAAGAATTAGTATAACTGGGGAGATACAAATGCATATCTACGGTAATATGACGACAAATCTACAGGCTCAACTCCATTATCGAACAATTTTTTTCCAGCATGTAGTTACGGGTTGGCAAGGTCAAGGTCGAGATAAATGTGACAAAGTTCTTTTACTGAATTTGTATAAGTGGGTACTTGATAACCCACCTCCCGCTAATATAGTTTTATTATCAGGAGAGATAGATTTCTCGTTTTCTCTACACAGTTTAAGAAACCTTCGGTATTTCATTGTCTTAATTAATCCTATTCAAACCTCTAGATCGTTATGCGCAGGTGCTGATAGACTTTTAAGTTGGAACAATATCATTACTGACTGTATGAAAAATGTTGTGAATGTGGGGAGAAATCCTCCTTTGGAGTTGAGCAGATCTATCAGTACCCGCCCTCGTGGATTTAATCCTAGTACATGTCTTTTGGGATCTGGACTGCTGTCTCATTCCCACCATTCTTAA 609 0.3744 MIANPINEKTIVWWDLDNCSMPQIINVDEIILGILSKLQRISITGEIQMHIYGNMTTNLQAQLHYRTIFFQHVVTGWQGQGRDKCDKVLLLNLYKWVLDNPPPANIVLLSGEIDFSFSLHSLRNLRYFIVLINPIQTSRSLCAGADRLLSWNNIITDCMKNVVNVGRNPPLELSRSISTRPRGFNPSTCLLGSGLLSHSHHS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g05033 202 CDD PIN_limkain_b1_N_like 9 134 - -
Vivi7g05033 202 PANTHER LIMKAIN B LKAP 7 153 IPR024768 GO:0005777|GO:0010468
Vivi7g05033 202 Pfam NYN domain 9 150 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g05033 Vivi-Chr7 135594170 135594778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g05033 3 151 C2H2 Transcription Factor Family AT5G61190 35.714 3.58e-25 100