Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g05010 ATGTCGGATGAAGAGCATCAATTTGAATCCAAGGCCGATGCCGGTGCCTCCAAAACCTACCCCCAGCAGGCCGGTACCATCCGTAAAAGTGGTCACATTGTTATCAAGAATCGTCCCTGCAAAGTTGTGGAGGTTTCCACATCTAAGATTGGAAAGCACGGTCGCGCAAAGTGTCATTTTGTTGCTATTGATATTTTTACCGGCAAGAAACTTGAAGATATTGTGCCTTCTTCTCATAATTGTGATGTTCCTCATGTGAATCGTACTGACTACCAGCTCATTGATATCTCTGAGGATGGATTTGTAAGATGA 312 0.4391 MSDEEHQFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKIGKHGRAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVR 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g05010 103 Gene3D - 1 85 IPR014722 -
Vivi7g05010 103 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 102 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Vivi7g05010 103 FunFam Eukaryotic translation initiation factor 5A 1 85 - -
Vivi7g05010 103 SUPERFAMILY Translation proteins SH3-like domain 15 93 IPR008991 -
Vivi7g05010 103 MobiDBLite consensus disorder prediction 1 27 - -
Vivi7g05010 103 NCBIfam translation initiation factor IF-5A 17 99 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g05010 Vivi-Chr7 134419975 134420607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g05010 1 102 Eukaryotic Initiation Factors Gene Family AT1G13950 91.176 1.79e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g05010 K03263 - ini:109174330 207.223