Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04982 ATGAAGGCTCTCAATTTTCGTTCAAGCAAAGATTTCATGCCAACCGATGATGAACTTCTTCAAAAATTTCTCTACAATAAAATTAACAACAAACCAATTCCCGATCATCTCAACATTCTCGAACATGATTTATTCGGTACTAACCAAAATCCTTTGGATATATGGAACGAATTTGAAGCTTCGTACTCATATGGCGGTAAAGATCTATATTTCTTTACTACCTTAAAGAAGAAATCCGCTACGAGCACACGCTCCGTTCGCACTATTGGCAATGGTAATTGGGAAGGCGAAGACACCGGAAAAAATATATTTGCCAAAGACACGAACCAACTCCTCGGTTTAAAAAAACGTTTTCGTTTTGAGAAGAGTAACACTCCTCAAGATGGTGGATGGATCTTGCATGAATATAACCTCCACAAATCTTTGATTAACAATACTCCGGTCAACAATTATGTGCTATGCAGATTTAGAAAGAATTTGAAACCAGAATCACAAAGTACACAAGAAAAATCAAGTATAGCTGATCAATCCAACTCTTATTTAAGAAAAACTTCAAGAACAAAAAATTGTTATGCACAAGAGAGTACAAAGAAGACTGTGATTGCTAAAAAAGGAGAACCTATCATTCTTAAACAAGAATCTGTAACTCCTAAACAAGTAGAACCAGTCATATCGAAACATAATGTTTTGGTGAAAAAATATACTATTTATGAAGAAGCAATAACTCAATCAAATAATGGTGGAAACAAGAGAAAATATGAGGATAATATAGAGTTTGGATATAAGGGAAGAAAAAGAAAATGCATAAGTACATGGCTAGAAGAGAAAAGATTTATTGAACAAAAAGCTATCTTTGAATATGAGTACAATAATCTACTTTTTGGAGAAAATATTGCACAAAATCCAAAAAATCAAGTTGATAGTAGAAATAGCAAAATTGAGGTGGTTGAAAGAACTAAGAAAAGAGAGTGTAGTTTTAACAAAGAAGATGACAATGACATCATCATGAATAAAGAAGAAGAAGGGGAACAAGAAGAAATAGAAGAAGAAGAAGATGATGATGATGAGATGTCTTGGCCCGAATTTTTTGCAAAGAATCTGTTGGAAATTAATGGAGGAGAAAAGATCATAAAAGAAGACGATGTTCAAATGCTTGACAATAGTTTTCATAAGGATTTTTTGTTGGGAAATAACATTATGTAA 1203 0.3283 MKALNFRSSKDFMPTDDELLQKFLYNKINNKPIPDHLNILEHDLFGTNQNPLDIWNEFEASYSYGGKDLYFFTTLKKKSATSTRSVRTIGNGNWEGEDTGKNIFAKDTNQLLGLKKRFRFEKSNTPQDGGWILHEYNLHKSLINNTPVNNYVLCRFRKNLKPESQSTQEKSSIADQSNSYLRKTSRTKNCYAQESTKKTVIAKKGEPIILKQESVTPKQVEPVISKHNVLVKKYTIYEEAITQSNNGGNKRKYEDNIEFGYKGRKRKCISTWLEEKRFIEQKAIFEYEYNNLLFGENIAQNPKNQVDSRNSKIEVVERTKKRECSFNKEDDNDIIMNKEEEGEQEEIEEEEDDDDEMSWPEFFAKNLLEINGGEKIIKEDDVQMLDNSFHKDFLLGNNIM 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04982 400 PANTHER NAC TRANSCRIPTION FACTOR 56 12 196 - -
Vivi7g04982 400 Pfam No apical meristem (NAM) protein 11 138 IPR003441 GO:0003677|GO:0006355
Vivi7g04982 400 MobiDBLite consensus disorder prediction 165 188 - -
Vivi7g04982 400 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Vivi7g04982 400 SUPERFAMILY NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
Vivi7g04982 400 Gene3D NAC domain 15 163 IPR036093 GO:0003677|GO:0006355
Vivi7g04982 400 MobiDBLite consensus disorder prediction 336 356 - -
Vivi7g04982 400 MobiDBLite consensus disorder prediction 164 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04982 Vivi-Chr7 132899938 132901598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04982 12 156 NAC Transcription Factor Family AT5G13180 34.459 7.13e-18 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi7g04982 NAM 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04982 - - psat:127093644 592.038