Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04980 ATGAATGCTCTCAATTCTCGTTTAAGCAAATATTTCATGCCAACCGATGATGAACTTCTTCAAAAATTTCTCTACAATAAAATTAACAATAAACCAATTCCCAATTATCTCAACATTATCGAACATGATTTGTTTGGTACTAATAAGAATCCGTTGGATATATGGAATGAGTTTGAAGCTTCGTTCTCATATGGCGGAAAAGACCTATATTTCTTTACTACCTTAAAGAAGAAATCTGCTACAAGCACACGCTCCATTCGCACTATTGGCAGTGGTAATTGGGAAGGCGAAGACACCGGAAAAAATATATTTGCCAAAGACACGGACCAACTCCTCGGTTTAAAAAAACGTTATCGTTTTGAGAGGAGTAACACTCCTCAAGATGGTGGATGGATCTTGCACGAATATAACCTCAACAAATCTTTGATTAACAATACTCCGGTCAACAATTATGTTCTATGCAGATTTAGAAAGAATTTGAAATCGGAATCAAAAAATACACAAGCAAAATCAAGTATAGGTGATAAATCCAATTCTCATTTAAGAAATATTTCACGGATAAAAAATTATTCTGCACAAGAGAGTAAAGAAAGAGAACCTATCATTCCTAAACAAGAAGAACCTGTCATTCCTAAACAAGTAGAACCAGTCATATCAGAAAATAATGTTTTGGTGAAAAAATATATTATTTATGAAGAAGAAATAACTCAATCAAACGATGGTGGAAACGAGGGAAAATATGGGGATGATGATGATGATGAAATGTCTTGTCCTGAATTTTTTGCAAAGAATCTGTTGGAAATTAATGGAGAAGGGTTCATAAAAGAAGACGATGTTCAAATACTTAACAATAGTTCTCATAAGGATTTTTTGTTGGAAAATAATATTATGTAA 894 0.3289 MNALNSRLSKYFMPTDDELLQKFLYNKINNKPIPNYLNIIEHDLFGTNKNPLDIWNEFEASFSYGGKDLYFFTTLKKKSATSTRSIRTIGSGNWEGEDTGKNIFAKDTDQLLGLKKRYRFERSNTPQDGGWILHEYNLNKSLINNTPVNNYVLCRFRKNLKSESKNTQAKSSIGDKSNSHLRNISRIKNYSAQESKEREPIIPKQEEPVIPKQVEPVISENNVLVKKYIIYEEEITQSNDGGNEGKYGDDDDDEMSCPEFFAKNLLEINGEGFIKEDDVQILNNSSHKDFLLENNIM 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04980 297 PANTHER NAC TRANSCRIPTION FACTOR 56 12 194 - -
Vivi7g04980 297 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Vivi7g04980 297 SUPERFAMILY NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
Vivi7g04980 297 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Vivi7g04980 297 Pfam No apical meristem (NAM) protein 11 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04980 Vivi-Chr7 132884200 132885332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04980 12 158 NAC Transcription Factor Family AT3G15510 32.716 6.77e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi7g04980 NAM 9.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04980 - - vvo:131620211 608.216