Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04972 ATGTCCATCACAAATCAATCTCAATCTCAACCTTCAGCATCACCTTCAGCTTCAGCTTCTCCCACCTCAACAACAAAACGCACCTCCAAGAACCGTGACTCAGCATTCCACGGCGTCCGGAAGCGAACCTGGGGACGCTATGTTTCAGAAATACGACTCCCAGGTCAGAAAACTCGGATATGGCTTGGCTCATTCCAGACGGCTGAAATGGCGGCGCGTGCTTATGACTCCGCGGCTTTCTTCTTAAAAGGTAGCTCGGCTAGCCTTAATTTTCCCGAAGAGGCTGTGTTTTTACCTCGTCCTGGTTCTTCTTCTAGGAAAGATATTCAATCGGCGGCGGCTAAAGCGGCTCGTCAACGAAGCCGCCAACAACAACAAGAAAATTCTTCTTCTTCTTCCATCGAAACGAAAAATGAAAATGAAAATAAAAATATTATTATTAATAATGACAATGATAATAATAATAATAATAATATTAATAATAGTAATAATAATAGTGTTGATGATTTTTCTATTGAGATGATGGAGTTTTGGAATCAAGAAGAATGTGGTGCATCGACGACGTCGTTTTGGGATATGAAAGATGCTCCTTTACTGAGTCCAACAAGGGTGGGGTCCATTTATGGAGATATGATGACATGGAACGAAGTGTTTGATTTCAATGATGACATTTTAGCCATGGCGCATCCATAA 693 0.4156 MSITNQSQSQPSASPSASASPTSTTKRTSKNRDSAFHGVRKRTWGRYVSEIRLPGQKTRIWLGSFQTAEMAARAYDSAAFFLKGSSASLNFPEEAVFLPRPGSSSRKDIQSAAAKAARQRSRQQQQENSSSSSIETKNENENKNIIINNDNDNNNNNNINNSNNNSVDDFSIEMMEFWNQEECGASTTSFWDMKDAPLLSPTRVGSIYGDMMTWNEVFDFNDDILAMAHP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04972 230 MobiDBLite consensus disorder prediction 1 37 - -
Vivi7g04972 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 160 - -
Vivi7g04972 230 MobiDBLite consensus disorder prediction 98 164 - -
Vivi7g04972 230 SUPERFAMILY DNA-binding domain 34 93 IPR016177 GO:0003677
Vivi7g04972 230 MobiDBLite consensus disorder prediction 104 164 - -
Vivi7g04972 230 MobiDBLite consensus disorder prediction 1 29 - -
Vivi7g04972 230 Pfam AP2 domain 36 84 IPR001471 GO:0003700|GO:0006355
Vivi7g04972 230 Gene3D AP2/ERF domain 35 94 IPR036955 GO:0003700|GO:0006355
Vivi7g04972 230 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Vivi7g04972 230 CDD AP2 34 93 IPR001471 GO:0003700|GO:0006355
Vivi7g04972 230 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Vivi7g04972 230 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Vivi7g04972 230 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Vivi7g04972 230 FunFam Ethylene-responsive transcription factor 2 34 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04972 Vivi-Chr7 131924687 131925718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04972 36 170 AP2-EREBP Transcription Factor Family AT2G35700 48.889 2.92e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vivi7g04972 AP2 2.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04972 K09286 - zju:107409738 137.117