Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04924 ATGATTCTTTTTTTTGTTTACGGCATACTAGAAGATGGACGTGAAGTGGCAGTGAAGCACCTAGATAAATACGGATCCAGTAGAGATCAACAATTTGAAAATGAAATAACTGTCCTGGCTAATGTACTTCATCAACATCTTGTCTTATTATATGGATGCACCACACTCAAAAGCCGCGAAGCTCTAGTCGTGTATGAATTTGTCCGCAATGGAACTGTGGCTGATCACCTTCATGGCAACAAAGCCACACCTAGAAAACTTCCTTGGCCTATGAGAATGAGAATTGCTGTGGAGACAGCAAGTGCATTGAAGTATCTTCATGCATGTAAGGTTATCCATAGAGATATGAAAACAAGTAATATTCTTCTAGATTCTGATTACCATGTGAAAGTGGCTGATTTTGGACTCGCACGCTTTATACCAACCGATCATAGCCGTGTTTCTACAACTCCACAAGGGACTCTAGGTTATCTAGATCCTGAGTACAACATCACTCATGAAGTTACTTATAAAACTGATGTGTACTGTTTTGGAGTGATTTTGATTGAGTTGATAACATCGTTTCCTGCTTATGATGTCGAGAGAAAGAATACAGGTGATCGTAACTTGTCTGAAACTGCTATGAAAAGAATTACAGATAAAACTTTTCATAGTATTGTGGATCGTACTCTCGGTTTTGATTCAGATTCTAGGGTGTGGAATATGATTAATGGTGTTGTTGAGCTGTCATATCAGTGTCTCCAAAGTTCCGGAGATATGAGACCAACAATGAAAGAGGTGTTCCAACGTTTGCAATTACTTGAGAAAGATAATGAAATTCAACCTGAAGTAGCTGGAAGCTCTAGCCCTAATGAGGAAATTAGGTTGATCAATAATGATCTAGCTTCACTTTCCCCTAGTTAA 903 0.3865 MILFFVYGILEDGREVAVKHLDKYGSSRDQQFENEITVLANVLHQHLVLLYGCTTLKSREALVVYEFVRNGTVADHLHGNKATPRKLPWPMRMRIAVETASALKYLHACKVIHRDMKTSNILLDSDYHVKVADFGLARFIPTDHSRVSTTPQGTLGYLDPEYNITHEVTYKTDVYCFGVILIELITSFPAYDVERKNTGDRNLSETAMKRITDKTFHSIVDRTLGFDSDSRVWNMINGVVELSYQCLQSSGDMRPTMKEVFQRLQLLEKDNEIQPEVAGSSSPNEEIRLINNDLASLSPS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04924 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Vivi7g04924 300 SMART serkin_6 4 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04924 300 SUPERFAMILY Protein kinase-like (PK-like) 10 276 IPR011009 -
Vivi7g04924 300 Gene3D Transferase(Phosphotransferase) domain 1 69 277 - -
Vivi7g04924 300 Gene3D Phosphorylase Kinase; domain 1 5 68 - -
Vivi7g04924 300 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04924 300 Pfam Protein tyrosine and serine/threonine kinase 13 264 IPR001245 GO:0004672|GO:0006468
Vivi7g04924 300 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 280 IPR044652 GO:0004672
Vivi7g04924 300 PIRSF ILK 11 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04924 Vivi-Chr7 128499388 128500361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04924 7 275 Receptor kinase-like Gene Family AT1G25390 51.292 2.87e-90 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi7g04924 Pkinase 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04924 - - vvo:131659108 372.859