Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04876 ATGATGTCTGATGAATCACAGAGAGTTGTGGTGATCCACCATGCATCTAGTGACTTAAGTACAAAAGCACTTAAATGGGCTATTAATGGCTTTTCACTTGATCATGGAGACACTCTTACACTTGTTGCAATTCTTCGCCATGTAAATAGTCCAACTAGTGCCCGATTTCGTGCAATATTCGGTACTGATCAAAATATTGTTGAGGAAGAGGTTGCTAAGAAGAAAGAAAAACTGCATAATCATCCATCCATCAGGAAAATTTCTGAGCAGTGTGAAAAACACAAGATTCAATTCTCGATAGAAGTGCTTCCGGGAAAGTTACCGGAGCACGCTATAAACGCTGCCGTCCGTTTGAAAGCAACATCGGTTATACTTGATAGAGACATGAAGAAGTATAAGAAGGATTTCATGGAGAGTCTCTCTTGTGCTTTGCTGATAATGAAAAGTGGTAACTCCATTAAGCACTTGAGAGGGCCAAGGAAAACAAAGTTTTCTTATACAGGTTATGACAATTCAGTTCCTGAATTCTCACCGAATTTGTGGAGCATGACAAACGCGGTTTTCCGTTCCAGATCAAGCTCTGATCTGACGAAAACCGGCTGTCATCAACTTCATTGTCAAACAAAACAAACGCCCGAAGATAAAGATCTAGATATGGCGAGAGGCTATTGCCTATTACCGATTCCAGATAATGTTCTTGAAATGTATCCTAAGGAGACAGAATTTGAACATATCAGAAACCATAAAACGTATCAAATAGTCGAAAAGTTCAAGAATTCTGTCTGCAAAGTGTGTGAGAACAAAAGGCCGAAATTTGAGTTGATGAAAGAATTCACATATGTGGAGCTGCATGAAGCAACACATGGTTTTTCGCCGAAGAATTATTTATCAGAAGGTGGATTTGGTTCTGTTTATTGGGGGAAGATGCAAGGACTCAAGATTGCTGTTAAGAAGCATAAGTTTGCAAGTCTTCAAGGAGAGAAGGAATTCAAATCAGAAGTTAATGCATTAAGCAAAGCAATACATGAAAATGTGGTCATGCTGCTAGGATCTTGTTCCGAGGGAAATAACAGATTTCTAGTATATGAATTTGTTTGCAATGGCTCGCTTGATCAACATTTATCGGAACACTCGAGAAAGCCTCTTACTTGGCCCGACAGGATCAAAGTAGCGATTGGAGCAGCGAAAGGCTTATTGTATTTGCATGAGAATAATATAATACATAGAGATGTGAGACCAAGTAACATTCTTGTCACGCATGATTACGAAGCAATGCTGGGAGATTTTGGTCTGGCTCGAACGGAACAAATGGACTCGGTATACTCTACAGACGTTGTTGGAACTTTAGGATATATGGCACCAGAATATGCGGAATCTGGTAAAGTATCAACCAAATCAGATGTGTATTCTTTCGGGGTGGTGCTTCTTCAGCTTATAACAGGAATGAGGACCACAGACAAAAAGATTGGACACAAAAGTCTTGTGGGATGGGCTAGGCCATTGCTAAAGGAAAGGAACTATCCGGATCTAATTGATGAAAGGATGATGGATACCTATGATTGCCATCAGCTCTTTTGGATGATTCGATTAGCAGAAAAATGTCTCACCAGGGATCCTCATAAGCGATTACCAATGGATACAGTTGTTAGTGCATTAACTCATATAGTAGAAGGCAGCACATGTAGCATGGTACTAAGAGACTGTTCTCCAGCACGGTCTGATTCATCTTATGACATGTCAGAATCTCCTATGTCAGATGTCTCACCAGAATCAGAAGATGAAGAAGATGGAATTGTCTGTGTAGGGTGCAGCACAGTTAACTTACGACCTCCACCATCTCCTCCATTAGGAAGCACTTCATGGAGTAGTACATCAAGCACATGTGTTCACATGGCTGAATGA 1902 0.4048 MMSDESQRVVVIHHASSDLSTKALKWAINGFSLDHGDTLTLVAILRHVNSPTSARFRAIFGTDQNIVEEEVAKKKEKLHNHPSIRKISEQCEKHKIQFSIEVLPGKLPEHAINAAVRLKATSVILDRDMKKYKKDFMESLSCALLIMKSGNSIKHLRGPRKTKFSYTGYDNSVPEFSPNLWSMTNAVFRSRSSSDLTKTGCHQLHCQTKQTPEDKDLDMARGYCLLPIPDNVLEMYPKETEFEHIRNHKTYQIVEKFKNSVCKVCENKRPKFELMKEFTYVELHEATHGFSPKNYLSEGGFGSVYWGKMQGLKIAVKKHKFASLQGEKEFKSEVNALSKAIHENVVMLLGSCSEGNNRFLVYEFVCNGSLDQHLSEHSRKPLTWPDRIKVAIGAAKGLLYLHENNIIHRDVRPSNILVTHDYEAMLGDFGLARTEQMDSVYSTDVVGTLGYMAPEYAESGKVSTKSDVYSFGVVLLQLITGMRTTDKKIGHKSLVGWARPLLKERNYPDLIDERMMDTYDCHQLFWMIRLAEKCLTRDPHKRLPMDTVVSALTHIVEGSTCSMVLRDCSPARSDSSYDMSESPMSDVSPESEDEEDGIVCVGCSTVNLRPPPSPPLGSTSWSSTSSTCVHMAE 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04876 633 MobiDBLite consensus disorder prediction 618 633 - -
Vivi7g04876 633 ProSiteProfiles Protein kinase domain profile. 290 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g04876 633 MobiDBLite consensus disorder prediction 571 595 - -
Vivi7g04876 633 FunFam Proline-rich receptor-like protein kinase PERK8 252 364 - -
Vivi7g04876 633 Gene3D Phosphorylase Kinase; domain 1 261 364 - -
Vivi7g04876 633 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 365 567 - -
Vivi7g04876 633 Gene3D Transferase(Phosphotransferase) domain 1 365 567 - -
Vivi7g04876 633 PANTHER OS01G0253100 PROTEIN 216 557 - -
Vivi7g04876 633 SMART tyrkin_6 290 552 IPR020635 GO:0004713|GO:0006468
Vivi7g04876 633 SUPERFAMILY Protein kinase-like (PK-like) 275 572 IPR011009 -
Vivi7g04876 633 Pfam Protein tyrosine and serine/threonine kinase 294 552 IPR001245 GO:0004672|GO:0006468
Vivi7g04876 633 Gene3D HUPs 1 145 IPR014729 -
Vivi7g04876 633 MobiDBLite consensus disorder prediction 610 633 - -
Vivi7g04876 633 ProSitePatterns Tyrosine protein kinases specific active-site signature. 406 418 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04876 Vivi-Chr7 127174325 127177586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04876 278 566 Trihelix Transcription Factor Family AT5G38560 44.702 1.47e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vivi7g04876 PK_Tyr_Ser-Thr 9.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04876 - - lsv:128129542 1005.74