Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04849 ATGCCGCGTAAGCACATTTATCATGCTGATTGTATATTGCCGTGGCTGGAATTGCATAATTCCTGCCTTGTTTGTCGTCATGAGTTTCCAACAGATGACCCTGACTATGAGCAGAGGGCTTGTGGCGGCGGAGGTGGTTCTGGTGCTGCTGGTGGAGATGATTTTGTGAGTAGGTTTAGGGTGTCTTTGCTGATTATGCCATTTAGGGTACTTCTGTTGTGGGGACAAGTAATGCTGGGAATATTGACAACAGTGATAATAGCAATAACAATAGAAATAGTGAGCATTCCAACACCGAGACCAGACAAGGAGATCTCGACTGAGAATCAGTCCTCTTTCATATGCTGA 348 0.4511 MPRKHIYHADCILPWLELHNSCLVCRHEFPTDDPDYEQRACGGGGGSGAAGGDDFVSRFRVSLLIMPFRVLLLWGQVMLGILTTVIIAITIEIVSIPTPRPDKEISTENQSSFIC 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04849 115 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 43 IPR013083 -
Vivi7g04849 115 SUPERFAMILY RING/U-box 4 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04849 Vivi-Chr7 126225668 126227164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04849 1 39 C3H Transcription Factor Family AT5G15820 58.974 1.75e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04849 K11982 - vvo:131618510 211.846