Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04844 ATGGCATCTTCAAATTCACCATGTGCAGCATGCAAGTTTCTACGCCGCAAATGCCAACCAGAATGTGCATTTGCACCTTATTTTCCACCTGATCAGCCACAAAAATTTGCAAATGTTCATAGAATTTTTGGGGCAAGTAATGTTACAAAGCTTCTCAATGATTTACACCCTCACCAACGTGAAGATGCTGTTAATTCTCTTGCTTATGAAGCTGAGATGCGACTTCGTGATCCGGTTTACGGTTGCGTCGGTGTAATTTCTCTCCTTCAACATCAACTTCGCCAGCTTCAGATGGATCTTTATTGCGCGAAATCGGAACTCTCACGGTACCAGAACTTAAGCATCGCAGCAGCCACGACAGGTCTCCTGACAGGGGACCCTGTCACGGCTGCTGCGAATAATTACCACCACCACACACAGAACACTGGGAGTGTTGGTGGTGGTGGTAATAATAGTAACGGTAACGGCCGTGATAATAATAACCATCATTTTCATCTTCAGCACCATCACCATCATCAGTTTTTTCCTAGAGATCAACATCAGCAACATAATTTGGTGGTTAGAAACTTTGATGCTGGAATTGGAAACAACTATGATGCGAATCTTTTGGCTATGAATATTTCTGCTAGCTTAGGGCAGATCAATCAGCTTCAACATCACAGTGCCGCCGGAGGTGGAGGTGATGACCGCCGTACTGTTAACCGCTCCTAG 711 0.4487 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSIAAATTGLLTGDPVTAAANNYHHHTQNTGSVGGGGNNSNGNGRDNNNHHFHLQHHHHHQFFPRDQHQQHNLVVRNFDAGIGNNYDANLLAMNISASLGQINQLQHHSAAGGGGDDRRTVNRS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04844 236 MobiDBLite consensus disorder prediction 138 160 - -
Vivi7g04844 236 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Vivi7g04844 236 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Vivi7g04844 236 MobiDBLite consensus disorder prediction 138 163 - -
Vivi7g04844 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04844 Vivi-Chr7 125769627 125770393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04844 2 236 AS2 family AT1G65620 59.574 9.31e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g04844 LOB 3.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04844 - - vvo:131618504 422.165