Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04841 ATGAGTTCCGTTCAAATTCTATCCACCACAATAATTCATGCACCAAATCACAATCTCAATCTCTCAAATCATCATACAATCGATCTAACACCATGGGATCTTCAATATCTCCCATTTGGATACAATCAAATCGGTCTTATTTATCAACACAATTCTGAATTAGATACAGAAAATCAAATCCAACTCCTTAAACAATCTCTCACCTCTACTCTTGAATTCTTTCCACCTTTCACAGGACGGCTCAATATCACGGAACACGAAGATAACACTATCTCTTGTTCCATCAATTGCAACAACGAAGGTGCACTCTTTGTTCACGCCGCAAATAAAAATATTAGTGTAAGAGACATCCTTGGACCAACTTATCTTCCAGATATTTTTTATTCATTTTTTCAACTGAACGGAGTTAAGAATTACGAAGGGACGTCACAACCATTACTCGCGATCCAAGTAACAGAGTTAACCGATGGCATCATTATTGGCTGTTCAATCAGTCATGTGGTTGTTGATGGTACTTCTCTTTGGCATTTCATCAATTCATGGGCCAAAATCTCGAGAGGTAATTTCGAAATTTCAAAAATTCCATCTTTCCAACGATGGTTTCCACCAGGTATTCAACTTCCAATTCGATTTCATTTCCCAATAGAACCACGAGATAGTCTCTCTAATGATCAAAATAATGAAGAACAAAAACTCAACACTACAATGTCGGAGAGATTATTTCATTTCTCAAAAGAGAATATTACAAAATTAAAATCCAAAGCCAATTTAGAGGCTGGTACAAAAAACATATCTTCTTTGCAAGCAGTTTTCACTCACGTTTGGCGCTCTATTATACGATGCAAGAATCTTGATACGCAAGAAGAATTGAATTTCGTGATAGATATAGGCGTTAGACCAAGGTTTATTCCTCCGTTGCCAGAGGAATATTTTGGTAATGCTGTGATGGAGTTTGTGGTTACTGTGAAAGTCTGTGAATTAATGGAAGATGGTGGACTTGGTAAATGCGCTTTGAAGATGAACAAGATAATTGCTATGCACTCTGACGAGAAGTTAAAGAATCATTATGAAGATTGGTTAGCTGCACCGAGTTTTGTTTTTAAAGACGGTGATGTGGGAAATAGGAATTCATTGGCGATTGGTAGTTCGCCTTGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGAAAACCTGTGGCGGTAAGAAATGGGGGTGCAAATAAAAAAAATGGAAAGATTTATGTTTCTGCTGGTATTGAAGAAGGTAGTATAAACCTTGAAGTATGTCTTGATTATGAAATTTTGGAGGCAATCGGAAATGATTCTGAGTTTATGGATGCTGTGTGTAGCTAA 1353 0.3688 MSSVQILSTTIIHAPNHNLNLSNHHTIDLTPWDLQYLPFGYNQIGLIYQHNSELDTENQIQLLKQSLTSTLEFFPPFTGRLNITEHEDNTISCSINCNNEGALFVHAANKNISVRDILGPTYLPDIFYSFFQLNGVKNYEGTSQPLLAIQVTELTDGIIIGCSISHVVVDGTSLWHFINSWAKISRGNFEISKIPSFQRWFPPGIQLPIRFHFPIEPRDSLSNDQNNEEQKLNTTMSERLFHFSKENITKLKSKANLEAGTKNISSLQAVFTHVWRSIIRCKNLDTQEELNFVIDIGVRPRFIPPLPEEYFGNAVMEFVVTVKVCELMEDGGLGKCALKMNKIIAMHSDEKLKNHYEDWLAAPSFVFKDGDVGNRNSLAIGSSPWFDVYGNDFGWGKPVAVRNGGANKKNGKIYVSAGIEEGSINLEVCLDYEILEAIGNDSEFMDAVCS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04841 450 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 445 - -
Vivi7g04841 450 Pfam Transferase family 4 445 - -
Vivi7g04841 450 Gene3D - 2 209 IPR023213 -
Vivi7g04841 450 Gene3D - 217 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04841 Vivi-Chr7 125273286 125274881 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04841 61 436 Monolignol Biosynthesis Gene Families AT5G48930 26.463 3.12e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04841 - - psat:127075665 540.806