Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04836 ATGAGTTCTGTCCAAATCCTTTCCTCCACCACAGTTCATGCACCAAATCACTCTAATCACCACACCATCGATCTAACACCATGGGATCTTCAATTCCTCACTTTTGGTTTCAATCAAATGGGTTTTCTTTATCGCCACCATAACAAATTAGATACAACAAATCAAATCCTACATCTCAAACACTCCTTTTCCTCTACCCTTAATTTTTTTCAGCCCCTTACCGGTCGTCTCAAAATCACTGAATACGAAGATAACACTATCTCATGCTCTATCAACTGCAACAACGAAGGTGCACTCTTCGTTCACGTTGTAGCAAAAAATATAAGTGTTGCGGATATTCTTGAACCTACTTATCTTCCTCCTATTCATCACTCATTTTTTTCATTGAATGGAGTTAAAAACTACCATGGGACATCAATACCGCTTCTTGCCGCTCAAGTAACAGAGTTAGTCAATGGCATCTTTATTGGCATCACAATCAATCATGTGCTTGGTGATGGTTATTTGTTTTCCCATTTTACTAATTCATGGGCGAGAATGTCGAAAGGTTGTTTAAAAATATCTCTACTTCCGAATTTTGAACGTTGGTTTCCTAAAGGGATTGAATGTCCGATTAGGTTTCCTTTCACAATAGAGCCACAAGAATATCATTCTAGTGATGAAAATGAAGGAAAGAAACTCAACCCACCAGAGAGAATATTTCGTTTCACAAAAGAGAATATTGCAGAACTAAAATTCAAAGCCAATTTAGAGGCTGGAACAAAGAATATATCTTCTTTGCAAGCACTTTTTACTCATATTTGGCGTTCTTTTATACGTTCTAAAAATCTTGACCCACAAATTGAAGTGAGTTTTGTATTGGATTTAAGCGTTAGACAAAGACTGGTTCCTCCGTTGCAAGAGGATTACTTTGGTAATGCTGTGATAGAATGTGTGGTTACCATGAAAGCTGGTGAATTGTTGGAAGATGGCGGACTTGGTAAAGGTGCATTGAAGATTAATAAGATGATTTCTTTGCATTCTGATGAGAAGTTAAGGAGTCATTATGAAAATTGGTTGATAAAACCAAGTTTTGTTATTACTCCTGATGATGTTGTGAATAATAATTCATTGGTGATTGGTAGTTCACCTTGGTTTGATGTTTATGGGAATGATTATGGTTGGGGAAGACCTGTGGGAGTTCGAAGTGGAAGTGCAGATAAAAGAAATGGGAAGATTTATGTGAATGCAGGGGTAGAAAAGGGTAATTTGGAGCTTGAAGTGTGTCATCCTTATGAAATTTTGGAGGCAATGAGAAATGATCAGGAGTTTATGATGTGTCCACCTAATGTGTCTTCTAAGTTATAA 1347 0.3705 MSSVQILSSTTVHAPNHSNHHTIDLTPWDLQFLTFGFNQMGFLYRHHNKLDTTNQILHLKHSFSSTLNFFQPLTGRLKITEYEDNTISCSINCNNEGALFVHVVAKNISVADILEPTYLPPIHHSFFSLNGVKNYHGTSIPLLAAQVTELVNGIFIGITINHVLGDGYLFSHFTNSWARMSKGCLKISLLPNFERWFPKGIECPIRFPFTIEPQEYHSSDENEGKKLNPPERIFRFTKENIAELKFKANLEAGTKNISSLQALFTHIWRSFIRSKNLDPQIEVSFVLDLSVRQRLVPPLQEDYFGNAVIECVVTMKAGELLEDGGLGKGALKINKMISLHSDEKLRSHYENWLIKPSFVITPDDVVNNNSLVIGSSPWFDVYGNDYGWGRPVGVRSGSADKRNGKIYVNAGVEKGNLELEVCHPYEILEAMRNDQEFMMCPPNVSSKL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04836 448 Gene3D - 2 204 IPR023213 -
Vivi7g04836 448 Gene3D - 212 433 IPR023213 -
Vivi7g04836 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 438 - -
Vivi7g04836 448 Pfam Transferase family 3 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04836 Vivi-Chr7 125093952 125095473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04836 59 422 Monolignol Biosynthesis Gene Families AT5G48930 26.913 1.66e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04836 - - psat:127075665 588.186