Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04809 ATGGGAAGTAGAATCAGGGTTAGTTTTGAAGATGAGAAGGGAGCAGAAACAGGAATGCCGAGCTTCAATTCCGACGATGCATGTTATACAGAAGGGAACACAGTTGATACTTTTCATGTTTCTGACTTTGGAGCTTTCGGTCAGCCGTATCGCTTAGAGGATGCTGTTGCTCTGAGTGGAAATTCAAACTCGATTTTTAACTCGCTAAAACAAAGTGGCCAGACAATTTCTCCCGGCCCTGTTCACATAAGTACACTTGGAAAGTTACCGACGTCACTTGATAAAAGCCCCTTGGAGAATCAAACAGAGCCACATAGGTTGCAATTAACAAAGCTTCAATCATCAAATCCTAGCAGTAGTACGATATTAAGTGTTCATATAGATAACCAGGAAGAGTTTGCCATGGCCGATGCCAGTCCTAGGACTGATATTTCTACGGATGTTGACACCGATGACAAGAATCAACGGTTTGATACAAATCAATCCCTTGCTCCCGTGGGTTCTGACTCCAGCGACAGATCAAAGGATAAATCAGATCAAAAGACTCTCCGCAGGCTCGCTCAAAATCGTGAGGCAGCAAGAAAAAGCCGGTTGAGAAAAAAAGCCTATGTCCAACAGTTGGAAAGTAGTCGTTTGAAGCTGACTCAACTAGAGCAAGAGCTTCAGCGAGCCAGACAACAGGGAGTCTTCATATCAAGCTCGGGTGAACAAACACATTCACTGAGTGGAAATGGGGCAATGCAATTCGATGCAGAATATGCAAGGTGGCTAGAAGAGCAGAATCGACAAATTAACGAACTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACCGAACTTCGCATGATTGTTGATGGTATATTGGCACATTACGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCTAAGGCCGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCCGCCGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGTTCGTCTGAGCTTCTCAAGCTTCTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAGTTGATGGGTATTACCAACTTGCAACAATCCTCCCAACAAGCAGAAGACGCATTGTCTCAAGGCATGGAAGCATTACAACAGTCCCTCGCAGAGACGTTGTCCACCGGCGCACCGTCCTCATCTGGTTCCTCAGGGAATGTCGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTCGGGACACTCGAGGGCTTCATTCGACAGGCTGACAATCTGCGCCAGCAGACTCTACAACAAATGCACCGAATACTGACAACACGACAATCGGCTCGTGCACTCCTTGCCATACATGATTACTTTTCGCGGCTACGTGCTCTCAGCTCGCTCTGGCTGGCCCGTCCAAGAGATTAA 1401 0.4625 MGSRIRVSFEDEKGAETGMPSFNSDDACYTEGNTVDTFHVSDFGAFGQPYRLEDAVALSGNSNSIFNSLKQSGQTISPGPVHISTLGKLPTSLDKSPLENQTEPHRLQLTKLQSSNPSSSTILSVHIDNQEEFAMADASPRTDISTDVDTDDKNQRFDTNQSLAPVGSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGEQTHSLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPSSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04809 466 PANTHER TRANSCRIPTION FACTOR TGA9 130 465 - -
Vivi7g04809 466 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 223 IPR004827 GO:0003700|GO:0006355
Vivi7g04809 466 SUPERFAMILY Leucine zipper domain 181 224 IPR046347 GO:0003700|GO:0006355
Vivi7g04809 466 FunFam BZIP family transcription factor 180 229 - -
Vivi7g04809 466 Pfam Basic region leucine zipper 177 223 IPR004827 GO:0003700|GO:0006355
Vivi7g04809 466 ProSiteProfiles DOG1 domain profile. 246 463 IPR025422 GO:0006351|GO:0043565
Vivi7g04809 466 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Vivi7g04809 466 SMART brlzneu 177 240 IPR004827 GO:0003700|GO:0006355
Vivi7g04809 466 Gene3D - 180 229 - -
Vivi7g04809 466 Pfam Seed dormancy control 263 339 IPR025422 GO:0006351|GO:0043565
Vivi7g04809 466 CDD bZIP_HBP1b-like 181 233 - -
Vivi7g04809 466 Coils Coil 200 227 - -
Vivi7g04809 466 Coils Coil 257 277 - -
Vivi7g04809 466 MobiDBLite consensus disorder prediction 1 23 - -
Vivi7g04809 466 MobiDBLite consensus disorder prediction 135 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04809 Vivi-Chr7 123806458 123811816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04809 135 466 bZIP Transcription Factor Family AT3G12250 78.614 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi7g04809 DOG1 5.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04809 K14431 - gmx:100101881 731.865