Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04808 ATGAGAAGGGAGCAGAAACAGGAATGCCGAGCTTCAATTCCGACGATGCATGAAGGGAACACAGTTGATACTTTTCATGTTTCTGACTTTGGAGCTTTCGGTCAGCCGTATCGCTTAGAGGATGCTGTTGCTCTGAGTGGAAATTCAAACTCGATTTTTAACTCGCTAAAACAAAGTGGCCAGACAATTTCTCCCGGCCCTGTTCACATAAGTACACTTGGAAAGTTACCGACGTCACTTGATAAAAGCCCCTTGGAGAATCAAACAGAGCCACATAGGTTGCAATTAACAAAGCTTCAATCATCAAATCCTAGCAGTAGTACGATATTAAGTGTTCATATAGATAACCAGGAAGAGTTTGCCATGGCCGATGCCAGTCCTAGGACTGATATTTCTACGGATGTTGACACCGATGACAAGAATCAACGGTTTGATACAAATCAATCCCTTGCTCCCGTGGGTTCTGACTCCAGCGACAGATCAAAGGATAAATCAGATCAAAAGACTCTCCGCAGGCTCGCTCAAAATCGTGAGGCAGCAAGAAAAAGCCGGTTGAGAAAAAAAGCCTATGTCCAACAGTTGGAAAGTAGTCGTTTGAAGCTGACTCAACTAGAGCAAGAGCTTCAGCGAGCCAGACAACAGGGAGTCTTCATATCAAGCTCGGGTGAACAAACACATTCACTGAGTGGAAATGGGGCAATGCAATTCGATGCAGAATATGCAAGGTGGCTAGAAGAGCAGAATCGACAAATTAACGAACTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACCGAACTTCGCATGATTGTTGATGGTATATTGGCACATTACGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCTAAGGCCGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCCGCCGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGTTCGTCTGAGCTTCTCAAGCTTCTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAGTTGATGGGTATTACCAACTTGCAACAATCCTCCCAACAAGCAGAAGACGCATTGTCTCAAGGCATGGAAGCATTACAACAGTCCCTCGCAGAGACGTTGTCCACCGGCGCACCGTCCTCATCTGGTTCCTCAGGGAATGTCGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTCGGGACACTCGAGGGCTTCATTCGACAGGCTGACAATCTGCGCCAGCAGACTCTACAACAAATGCACCGAATACTGACAACACGACAATCGGCTCGTGCACTCCTTGCCATACATGATTACTTTTCGCGGCTACGTGCTCTCAGCTCGCTCTGGCTGGCCCGTCCAAGAGATTAA 1362 0.4655 MRREQKQECRASIPTMHEGNTVDTFHVSDFGAFGQPYRLEDAVALSGNSNSIFNSLKQSGQTISPGPVHISTLGKLPTSLDKSPLENQTEPHRLQLTKLQSSNPSSSTILSVHIDNQEEFAMADASPRTDISTDVDTDDKNQRFDTNQSLAPVGSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGEQTHSLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPSSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04808 453 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 210 IPR004827 GO:0003700|GO:0006355
Vivi7g04808 453 Gene3D - 167 216 - -
Vivi7g04808 453 MobiDBLite consensus disorder prediction 122 170 - -
Vivi7g04808 453 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 171 186 IPR004827 GO:0003700|GO:0006355
Vivi7g04808 453 Pfam Seed dormancy control 250 326 IPR025422 GO:0006351|GO:0043565
Vivi7g04808 453 Coils Coil 187 214 - -
Vivi7g04808 453 FunFam BZIP family transcription factor 167 216 - -
Vivi7g04808 453 Pfam Basic region leucine zipper 164 210 IPR004827 GO:0003700|GO:0006355
Vivi7g04808 453 Coils Coil 244 264 - -
Vivi7g04808 453 SUPERFAMILY Leucine zipper domain 168 211 IPR046347 GO:0003700|GO:0006355
Vivi7g04808 453 PANTHER TRANSCRIPTION FACTOR TGA9 117 452 - -
Vivi7g04808 453 CDD bZIP_HBP1b-like 168 220 - -
Vivi7g04808 453 ProSiteProfiles DOG1 domain profile. 233 450 IPR025422 GO:0006351|GO:0043565
Vivi7g04808 453 SMART brlzneu 164 227 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04808 Vivi-Chr7 123806289 123811816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04808 122 453 bZIP Transcription Factor Family AT3G12250 79.217 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi7g04808 DOG1 4.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04808 K14431 - gmx:100101881 701.434