Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04771 ATGGTTATGGCTTCAGAGACTCAGTTCCATGTTTTGGCTGTTGATGATAGTATTGTTGACAGAATGCTGATTGAAAAGCTTCTAAAAACTTCTTCATTTCAAGTTACTACAGTGGATTCTGCTACTAAGGCTTTAAGGTTTCTTGGTTTGGTTGATGATGTTGCTTCAGAAATTCATCAGGATGTAGAAGTTAATTTAATCATAACAGATTATTGTATGCCAGAGATGACTGGTTTTGATCTGCTCAGAAAAATCAAGGAATCCAAATCTTTTAAGGACATACCAGTTGTGATTATGTCCTCAGAGAATGTCCCATCTAGAATAAATAGATGTTTGGAAGAGGGAGCTGAAGAATTCTTCCTGAAACCAGTTAAACAATCAGATGTAAACAAGCTCAAACCTCATTTGTTGAAATCAAGAGTTAATGAAGGGCAAGAATAA 441 0.3537 MVMASETQFHVLAVDDSIVDRMLIEKLLKTSSFQVTTVDSATKALRFLGLVDDVASEIHQDVEVNLIITDYCMPEMTGFDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVKQSDVNKLKPHLLKSRVNEGQE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04771 146 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 138 IPR045279 GO:0009736
Vivi7g04771 146 Gene3D - 10 145 - -
Vivi7g04771 146 SUPERFAMILY CheY-like 8 131 IPR011006 -
Vivi7g04771 146 SMART REC_2 9 136 IPR001789 GO:0000160
Vivi7g04771 146 Pfam Response regulator receiver domain 11 129 IPR001789 GO:0000160
Vivi7g04771 146 CDD REC_typeA_ARR 11 132 - -
Vivi7g04771 146 ProSiteProfiles Response regulatory domain profile. 10 137 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04771 Vivi-Chr7 122538738 122540081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04771 1 146 Response Regulator Gene Family AT2G41310 66.234 8.83e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi7g04771 Response_reg 1.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04771 K14492 - gmx:100787436 240.736